RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CACTINQ8WUQ7 758 aaKnown RBP10.78□□□□□ -0.68
CPSF4-213ENST00000484112 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SUSD3Q96L08 255 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 FGFBP2Q9BYJ0 223 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 TRPV5Q9NQA5 729 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 TIMM13Q9Y5L4 95 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-213ENST00000484112 NCANO14594 1321 aa10.78□□□□□ -0.68
CPSF4-213ENST00000484112 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
CPSF4-213ENST00000484112 A0A1W2PRU2 124 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 ZNF233A6NK53 670 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 DPYSL4O14531 572 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
CPSF4-213ENST00000484112 OR4Q2P0C623 313 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 CASP1P29466 404 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 HOXD13P35453 343 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 PPP1R2P41236 205 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 ACOT2P49753 483 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 SPAG1Q07617 926 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 CSRP2Q16527 193 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 NFIL3Q16649 462 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 Q6ZS52 159 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 LONP2Q86WA8 852 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 GRAMD1CQ8IYS0 662 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
CPSF4-213ENST00000484112 XXYLT1Q8NBI6 393 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 LEMD2Q8NC56 503 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 KIAA0895Q8NCT3 520 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 HPS3Q969F9 1004 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 RSPRY1Q96DX4 576 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 CBWD1Q9BRT8 395 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 FAM213AQ9BRX8 229 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 GPR88Q9GZN0 384 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 AGPAT3Q9NRZ7 376 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 RBAKQ9NYW8 714 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-213ENST00000484112 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 TUBGCP4Q9UGJ1 667 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 PCDHB8Q9UN66 801 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 YIPF1Q9Y548 306 aa10.77□□□□□ -0.69
CPSF4-213ENST00000484112 TRIP11Q15643 1979 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 TISP43B9A030 160 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 AXIN1O15169 862 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 CHADO15335 359 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 CALUO43852 315 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-213ENST00000484112 LRP3O75074 770 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 HOXC13P31276 330 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 PNPLA4P41247 253 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 AARSP49588 968 aaKnown RBP eCLIP10.76□□□□□ -0.693e-6■■■■■ 61.8
CPSF4-213ENST00000484112 EPHB3P54753 998 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 YWHAHQ04917 246 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-213ENST00000484112 ENPEPQ07075 957 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 DUSP4Q13115 394 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 PON2Q15165 354 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 STXBP5Q5T5C0 1151 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 IL31Q6EBC2 164 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 JADE1Q6IE81 842 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 USP37Q86T82 979 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 ARID3BQ8IVW6 561 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-213ENST00000484112 GLIS3Q8NEA6 775 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 E2F7Q96AV8 911 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 ZFYVE19Q96K21 471 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 C8orf33Q9H7E9 229 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-213ENST00000484112 TRPV4Q9HBA0 871 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 C2orf42Q9NWW7 574 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 MAFFQ9ULX9 164 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 TRAF3IP3Q9Y228 551 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 SLC27A5Q9Y2P5 690 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 TICRRQ7Z2Z1 1910 aa10.76□□□□□ -0.69
CPSF4-213ENST00000484112 CACNA1BQ00975 2339 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ANO9A1A5B4 782 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 SPECC1L-ADORA2AF8WAN1 911 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 K7ESF4 209 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 M0QZQ0 153 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ARNTLO00327 626 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 PIRO00625 290 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 MAPK13O15264 365 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 RPL13P26373 211 aaKnown RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 CNR2P34972 360 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ALDH1A3P47895 512 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 CDR1P51861 262 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 AP3M2P53677 418 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 EPHA5P54756 1037 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 PLD1Q13393 1074 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 CCDC6Q16204 474 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 SNRNP35Q16560 246 aaKnown RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 AASDHQ4L235 1098 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 DGKKQ5KSL6 1271 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 TXNDC11Q6PKC3 985 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 DSTYKQ6XUX3 929 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 WDR49Q8IV35 697 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 NELFCDQ8IXH7 590 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 FAM160A2Q8N612 972 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-213ENST00000484112 SMARCE1Q969G3 411 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms