RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 COLGALT2Q8IYK4 626 aa6.95□□□□□ -1.3
PMS1-219ENST00000483293 TRIM43Q96BQ3 446 aaPredicted RBP6.95□□□□□ -1.3
PMS1-219ENST00000483293 NMD3Q96D46 503 aaKnown RBP6.95□□□□□ -1.3
PMS1-219ENST00000483293 TNIP3Q96KP6 325 aa6.95□□□□□ -1.3
PMS1-219ENST00000483293 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
PMS1-219ENST00000483293 BTBD1Q9H0C5 482 aa6.95□□□□□ -1.3
PMS1-219ENST00000483293 CASS4Q9NQ75 786 aa6.95□□□□□ -1.3
PMS1-219ENST00000483293 A1CFQ9NQ94 594 aaKnown RBP6.95□□□□□ -1.3
PMS1-219ENST00000483293 DKK2Q9UBU2 259 aa6.95□□□□□ -1.3
PMS1-219ENST00000483293 A0A1W2PS29 197 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 NARSO43776 548 aaKnown RBP6.94□□□□□ -1.3
PMS1-219ENST00000483293 STT3AP46977 705 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 HNRNPMP52272 730 aaKnown RBP eCLIP6.94□□□□□ -1.3
PMS1-219ENST00000483293 TCF15Q12870 199 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 PTPAQ15257 358 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 SF3B3Q15393 1217 aaKnown RBP6.94□□□□□ -1.3
PMS1-219ENST00000483293 PLA1AQ53H76 456 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 LY6G5CQ5SRR4 150 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 RBM20Q5T481 1227 aaKnown RBP6.94□□□□□ -1.3
PMS1-219ENST00000483293 VPS53Q5VIR6 699 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 UNC13DQ70J99 1090 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 SRLQ86TD4 932 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 VRK3Q8IV63 474 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 SERHL2Q9H4I8 314 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 NEU2Q9Y3R4 380 aa6.94□□□□□ -1.3
PMS1-219ENST00000483293 A0A0B4J269 797 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 SUV39H1O43463 412 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 NCK2O43639 380 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 PEX11BO96011 259 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 PDHA1P08559 390 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 PARP1P09874 1014 aaKnown RBP6.93□□□□□ -1.3
PMS1-219ENST00000483293 PXNP49023 591 aaPredicted RBP6.93□□□□□ -1.3
PMS1-219ENST00000483293 AK2P54819 239 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TUBB3Q13509 450 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 MICALCLQ6ZW33 695 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TMPRSS9Q7Z410 1059 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 ARHGEF19Q8IW93 802 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 LCORLQ8N3X6 602 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TOR1AIP2Q8NFQ8 470 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 LENG9Q96B70 501 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 CCDC138Q96M89 665 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 Q96MF0 132 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 RIPOR3Q96MK2 946 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 MYD88Q99836 296 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TPSD1Q9BZJ3 242 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 CHST8Q9H2A9 424 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TMEM74BQ9NUR3 256 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 INTS13Q9NVM9 706 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 TBCCD1Q9NVR7 557 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 ZSCAN32Q9NX65 697 aa6.93□□□□□ -1.3
PMS1-219ENST00000483293 H7C4K7 107 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 RAB27BO00194 218 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 PEX14O75381 377 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 IL18RAPO95256 599 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 ATXN1LP0C7T5 689 aaKnown RBP6.92□□□□□ -1.3
PMS1-219ENST00000483293 PPP3CBP16298 524 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 CD6P30203 668 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 ZEB1P37275 1124 aaPredicted RBP6.92□□□□□ -1.3
PMS1-219ENST00000483293 VIPR2P41587 438 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 CASP5P51878 434 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
PMS1-219ENST00000483293 DAG1Q14118 895 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 BRD3Q15059 726 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 ZIK1Q3SY52 487 aaPredicted RBP6.92□□□□□ -1.3
PMS1-219ENST00000483293 SP5Q6BEB4 398 aaPredicted RBP6.92□□□□□ -1.3
PMS1-219ENST00000483293 KCTD20Q7Z5Y7 419 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 SSH3Q8TE77 659 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 LPIN2Q92539 896 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 SNX22Q96L94 193 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 MOGAT1Q96PD6 335 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 SERTAD3Q9UJW9 196 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 SHOC2Q9UQ13 582 aa6.92□□□□□ -1.3
PMS1-219ENST00000483293 E7ENX8 843 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 TRIAP1O43715 76 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 MAKP20794 623 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 TNFSF4P23510 183 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 CARSP49589 748 aaKnown RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 RHBDL3P58872 404 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 SP2Q02086 613 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 TAP2Q03519 686 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 SCAPQ12770 1279 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 EIF2B5Q13144 721 aaKnown RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 HLXQ14774 488 aaPredicted RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 FAM209BQ5JX69 171 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 CACHD1Q5VU97 1274 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 RGS7BPQ6MZT1 257 aaPredicted RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 RHOUQ7L0Q8 258 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 SLC44A3Q8N4M1 653 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 B3GALNT2Q8NCR0 500 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
PMS1-219ENST00000483293 PPP2R3CQ969Q6 453 aa6.91□□□□□ -1.3
PMS1-219ENST00000483293 SPSB4Q96A44 273 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms