RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 RNF219Q5W0B1 726 aaPredicted RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 TSHZ1Q6ZSZ6 1077 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 MS4A14Q96JA4 679 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 DDX50Q9BQ39 737 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 CARD9Q9H257 536 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 DDIT4Q9NX09 232 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 Q9Y3F1 56 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 C22orf31O95567 290 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 KRT10P13645 584 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 RECQLP46063 649 aaPredicted RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 DAW1Q8N136 415 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 ARHGAP18Q8N392 663 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 PDE1BQ01064 536 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
PCCB-214ENST00000478469 AP1B1Q10567 949 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 MEA1Q16626 185 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 GEN1Q17RS7 908 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CAPN6Q9Y6Q1 641 aa12.63□□□□□ -0.39
PCCB-214ENST00000478469 CACNA1SQ13698 1873 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 DDX3XO00571 662 aaKnown RBP eCLIP12.62□□□□□ -0.393e-13■■■■□ 24.8
PCCB-214ENST00000478469 GIPC1O14908 333 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 LGR5O75473 907 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 SEC31AO94979 1220 aaKnown RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 SNAI1O95863 264 aaPredicted RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 MAP3K7CLP57077 242 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 MCL1Q07820 350 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 LPPQ93052 612 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 M0QYT0 321 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 LRG1P02750 347 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ARL4CP56559 192 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 GPS1Q13098 491 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 C10orf120Q5SQS8 335 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 NYAP1Q6ZVC0 841 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 TMEM86AQ8N2M4 240 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 GIT1Q9Y2X7 761 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 EPHB6O15197 1021 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 KRT14P02533 472 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 SLC4A1P02730 911 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 PRKCIP41743 596 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 EPM2AIP1Q7L775 607 aaPredicted RBP12.62□□□□□ -0.39
PCCB-214ENST00000478469 VPS52Q8N1B4 723 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 TMEM199Q8N511 208 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 SHC3Q92529 594 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 SP110Q9HB58 689 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 OSGEPQ9NPF4 335 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 CNTNAP2Q9UHC6 1331 aa12.62□□□□□ -0.39
PCCB-214ENST00000478469 FBXO21O94952 628 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 MX2P20592 715 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 DNAJB2P25686 324 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 CAV1Q03135 178 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 MAPK7Q13164 816 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 NECAB2Q7Z6G3 386 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
PCCB-214ENST00000478469 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 FBXO32Q969P5 355 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 B4GALT4O60513 344 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 CST8O60676 142 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 ASS1P00966 412 aaKnown RBP12.61□□□□□ -0.39
PCCB-214ENST00000478469 SAT1P21673 171 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 NNMTP40261 264 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
PCCB-214ENST00000478469 ACLYP53396 1101 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 SEPT6Q14141 434 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
PCCB-214ENST00000478469 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 UNC93AQ86WB7 457 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 MCOLN2Q8IZK6 566 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 VCPIP1Q96JH7 1222 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 BTBD6Q96KE9 485 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCCB-214ENST00000478469 GANQ9H2C0 597 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
PCCB-214ENST00000478469 IPPQ9Y573 584 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms