RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FGFR1OPO95684 399 aaKnown RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 GNA14O95837 355 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 PCSK1P29120 753 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 MTHFRP42898 656 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 ASPAP45381 313 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 FMO5P49326 533 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 MCCD1P59942 119 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 ZP2Q05996 745 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 ORC1Q13415 861 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 STX1AQ16623 288 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 MGAT5BQ3V5L5 792 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 GRASPQ7Z6J2 395 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 TCEAL8Q8IYN2 117 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 DCP1BQ8IZD4 617 aaKnown RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 TAF4BQ92750 862 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 RPGRIP1Q96KN7 1286 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 UHRF1Q96T88 793 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 LPIN3Q9BQK8 851 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 PHF7Q9BWX1 381 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 RHOBTB2Q9BYZ6 727 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 NIF3L1Q9GZT8 377 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 HCFC1R1Q9NWW0 138 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 HMGXB4Q9UGU5 601 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 GTF3C4Q9UKN8 822 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC6-222ENST00000478095 VCANP13611 3396 aa10.98□□□□□ -0.65
HDAC6-222ENST00000478095 SCN1AP35498 2009 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 XYLBO75191 536 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 HNRNPA1P09651 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 P4HA1P13674 534 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CD58P19256 250 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 HOXA9P31269 272 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 MTIF2P46199 727 aaKnown RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 GPR15P49685 360 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 MARSP56192 900 aaKnown RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 TYRO3Q06418 890 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 LRMPQ12912 555 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 UVSSAQ2YD98 709 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 MDH1BQ5I0G3 518 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 ADHFE1Q8IWW8 467 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CCDC150Q8NCX0 1101 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 STKLD1Q8NE28 680 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 SPATA18Q8TC71 538 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 MYLPFQ96A32 169 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 NECTIN4Q96NY8 510 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 PKMYT1Q99640 499 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 ARID3AQ99856 593 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 THAP9Q9H5L6 903 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CRTAC1Q9NQ79 661 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 SAMSN1Q9NSI8 373 aaKnown RBP10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CEP72Q9P209 647 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CDH9Q9ULB4 789 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 NFE2L3Q9Y4A8 694 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 CLUHO75153 1309 aa10.97□□□□□ -0.65
HDAC6-222ENST00000478095 C2CD4DB7Z1M9 353 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 AFPP02771 609 aaKnown RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 HAPLN1P10915 354 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 ATF6P18850 670 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 NDST1P52848 882 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 CYP27A1Q02318 531 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 WDR44Q5JSH3 913 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 SDHAF4Q5VUM1 108 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 SPATA2LQ8IUW3 424 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 SPPL2BQ8TCT7 592 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 TATDN2Q93075 761 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 CORO1BQ9BR76 489 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 BCO2Q9BYV7 579 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 WDR6Q9NNW5 1121 aaKnown RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 DNMT3BQ9UBC3 853 aaKnown RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 MAGEC2Q9UBF1 373 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-222ENST00000478095 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 COQ4Q9Y3A0 265 aa10.96□□□□□ -0.65
HDAC6-222ENST00000478095 PLXNA3P51805 1871 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 TSC2P49815 1807 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 SYCE3A1L190 88 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 CLDN5O00501 218 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 N4BP1O75113 896 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PAPLNO95428 1278 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 RHOP08100 348 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 FAM163BP0C2L3 166 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PTPN1P18031 435 aaKnown RBP10.95□□□□□ -0.66
HDAC6-222ENST00000478095 PTMSP20962 102 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 BDNFP23560 247 aa10.95□□□□□ -0.66
HDAC6-222ENST00000478095 FSHRP23945 695 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms