RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TMX2Q9Y320 296 aa8□□□□□ -1.13
SMC5-203ENST00000475540 FAM227AF5H4B4 570 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 PPFIA2O75334 1257 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 LLGL1Q15334 1064 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 ZNF783Q6ZMS7 281 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 OR6B3Q8NGW1 331 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 KBTBD7Q8WVZ9 684 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 FAM136AQ96C01 138 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 ACTRT3Q9BYD9 372 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 KLC4Q9NSK0 619 aa7.99□□□□□ -1.13
SMC5-203ENST00000475540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.99□□□□□ -1.13
SMC5-203ENST00000475540 PXNP49023 591 aaPredicted RBP7.98□□□□□ -1.13
SMC5-203ENST00000475540 SATB1Q01826 763 aa7.98□□□□□ -1.13
SMC5-203ENST00000475540 KIAA0319LQ8IZA0 1049 aa7.98□□□□□ -1.13
SMC5-203ENST00000475540 KLHL42Q9P2K6 505 aa7.98□□□□□ -1.13
SMC5-203ENST00000475540 L1RE1Q9UN81 338 aa7.98□□□□□ -1.13
SMC5-203ENST00000475540 DCLK1O15075 740 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 TBC1D4O60343 1298 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 NPR1P16066 1061 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 VIPR2P41587 438 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 GRIA3P42263 894 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 UCP3P55916 312 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 LOXL3P58215 753 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 ICE2Q659A1 982 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 LMBRD2Q68DH5 695 aaPredicted RBP7.97□□□□□ -1.13
SMC5-203ENST00000475540 CRAMP1Q96RY5 1269 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 ALG8Q9BVK2 526 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 TRIM54Q9BYV2 358 aa7.97□□□□□ -1.13
SMC5-203ENST00000475540 CFAP69A5D8W1 941 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 VSTM5A8MXK1 200 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 ADM5C9JUS6 153 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 BTN3A1O00481 513 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 CYP2C9P11712 490 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 XRCC6P12956 609 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMC5-203ENST00000475540 SLC7A1P30825 629 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 SLC11A2P49281 568 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
SMC5-203ENST00000475540 ZNF134P52741 427 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 ARFIP2P53365 341 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 MAPK10P53779 464 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 CACNA2D1P54289 1103 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 CNN3Q15417 329 aaKnown RBP7.96□□□□□ -1.14
SMC5-203ENST00000475540 TXNRD1Q16881 649 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 VPS53Q5VIR6 699 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 PPP4R4Q6NUP7 873 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 C14orf80Q86SX3 495 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 PEG10Q86TG7 708 aaKnown RBP7.96□□□□□ -1.14
SMC5-203ENST00000475540 FMNL3Q8IVF7 1028 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
SMC5-203ENST00000475540 FAM109AQ8N4B1 249 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMC5-203ENST00000475540 SLC15A4Q8N697 577 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 DNAJC5GQ8N7S2 189 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 IL31RAQ8NI17 732 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 SUCLG2Q96I99 432 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 PTDSS2Q9BVG9 487 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 ALG13Q9NP73 1137 aaKnown RBP7.96□□□□□ -1.14
SMC5-203ENST00000475540 SLC17A6Q9P2U8 582 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 SHOC2Q9UQ13 582 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 ADGRA2Q96PE1 1338 aa7.96□□□□□ -1.14
SMC5-203ENST00000475540 CACNB3P54284 484 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 LILRA4P59901 499 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 NANOS3P60323 173 aaKnown RBP7.95□□□□□ -1.14
SMC5-203ENST00000475540 CTBP1Q13363 440 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 SRGAP1Q7Z6B7 1085 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 GRASPQ7Z6J2 395 aaPredicted RBP7.95□□□□□ -1.14
SMC5-203ENST00000475540 COL23A1Q86Y22 540 aaPredicted RBP7.95□□□□□ -1.14
SMC5-203ENST00000475540 TTC8Q8TAM2 541 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 FKBP10Q96AY3 582 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 ATP6V0A4Q9HBG4 840 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 EHD3Q9NZN3 535 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 DDX20Q9UHI6 824 aaKnown RBP7.95□□□□□ -1.14
SMC5-203ENST00000475540 TPCN1Q9ULQ1 816 aa7.95□□□□□ -1.14
SMC5-203ENST00000475540 POLR2AP24928 1970 aaKnown RBP7.94□□□□□ -1.14
SMC5-203ENST00000475540 WDR27A2RRH5 827 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 RHOP08100 348 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 ATF3P18847 181 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 SLC13A2Q13183 592 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 TBCCQ15814 346 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 CCDC149Q6ZUS6 474 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 ANKS1AQ92625 1134 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 PBKQ96KB5 322 aa7.94□□□□□ -1.14
SMC5-203ENST00000475540 COL11A2P13942 1736 aaPredicted RBP7.93□□□□□ -1.14
SMC5-203ENST00000475540 VWC2LB2RUY7 222 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 PPM1DO15297 605 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 NR2F6P10588 404 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 EN2P19622 333 aaPredicted RBP7.93□□□□□ -1.14
SMC5-203ENST00000475540 LRPAP1P30533 357 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
SMC5-203ENST00000475540 WNT3P56703 355 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 RAB32Q13637 225 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 BMPR2Q13873 1038 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 E2F2Q14209 437 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 SLC44A4Q53GD3 710 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 PLAC9Q5JTB6 97 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 AKNAD1Q5T1N1 836 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 ARHGAP40Q5TG30 622 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 SWSAP1Q6NVH7 229 aa7.93□□□□□ -1.14
SMC5-203ENST00000475540 MPP5Q8N3R9 675 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms