RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 WDTC1Q8N5D0 677 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 APPL2Q8NEU8 664 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 OR6B3Q8NGW1 331 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 FEZF2Q8TBJ5 459 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 BTBD6Q96KE9 485 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 GAD1Q99259 594 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 NAP1L3Q99457 506 aaPredicted RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 ADAM2Q99965 735 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 RHOXF2Q9BQY4 288 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.82□□□□□ -0.682e-7■■■□□ 14.9
PCCB-213ENST00000475214 MRPL45Q9BRJ2 306 aaKnown RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 MIS12Q9H081 205 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 CARD9Q9H257 536 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 SYNCQ9H7C4 482 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 PRDM5Q9NQX1 630 aaPredicted RBP10.82□□□□□ -0.68
PCCB-213ENST00000475214 RNF19AQ9NV58 838 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 WDR35Q9P2L0 1181 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 HMGXB4Q9UGU5 601 aa10.82□□□□□ -0.68
PCCB-213ENST00000475214 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.82□□□□□ -0.68
PCCB-213ENST00000475214 DNAH12Q6ZR08 3092 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 SCN1AP35498 2009 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 A0A0U1RQF3 1178 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 DCDC2CA8MYV0 355 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 M0QYV0 167 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 PGRMC1O00264 195 aaKnown RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 O00370 1275 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 RPL9P32969 192 aaKnown RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 CTNNA1P35221 906 aaKnown RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 GNL1P36915 607 aaPredicted RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 BFSP2Q13515 415 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 SOWAHAQ2M3V2 549 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 TRIM60Q495X7 471 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 C2CD6Q53TS8 623 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 SEL1L2Q5TEA6 688 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 LCLAT1Q6UWP7 414 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 AGMOQ6ZNB7 445 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 FAM43BQ6ZT52 329 aaPredicted RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 PDCL2Q8N4E4 241 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 TOP6BLQ8N6T0 577 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 IPO4Q8TEX9 1081 aaKnown RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 LPPQ93052 612 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 C18orf8Q96DM3 657 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 TOX2Q96NM4 488 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 PLVAPQ9BX97 442 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 PARD6BQ9BYG5 372 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
PCCB-213ENST00000475214 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 GOLGA2P5Q9HBQ8 144 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 IP6K2Q9UHH9 426 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.81□□□□□ -0.68
PCCB-213ENST00000475214 PCDHA3Q9Y5H8 950 aa10.81□□□□□ -0.68
PCCB-213ENST00000475214 TARSL2A2RTX5 802 aaKnown RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 CCDC188H7C350 402 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 PODXLO00592 558 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 CYB561D2O14569 222 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 SPTLC1O15269 473 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 MGEA5O60502 916 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 ERLIN1O75477 346 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 PROSCO94903 275 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 CLTBP09497 229 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 SETSIPP0DME0 302 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 H2AFXP16104 143 aaPredicted RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 SELPP16109 830 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 WARSP23381 471 aaKnown RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 PAX3P23760 479 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 MAN1A1P33908 653 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 CDK7P50613 346 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 SCNN1GP51170 649 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 RWDD2BP57060 319 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 SNX16P57768 344 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 LILRA4P59901 499 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 RNASE9P60153 205 aaKnown RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 TLE2Q04725 743 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 ZNF268Q14587 947 aaPredicted RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 BRD3Q15059 726 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 GOLGA7BQ2TAP0 167 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 GLE1Q53GS7 698 aaKnown RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 ARHGAP17Q68EM7 881 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 DCUN1D2Q6PH85 259 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 ACOT1Q86TX2 421 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 C3orf20Q8ND61 904 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 RUBCNQ92622 972 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 CD101Q93033 1021 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
PCCB-213ENST00000475214 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 FTHL17Q9BXU8 183 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 ANKZF1Q9H8Y5 726 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 RGS18Q9NS28 235 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
PCCB-213ENST00000475214 TSPAN16Q9UKR8 245 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms