RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 LIMK1P53667 647 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 TNK2Q07912 1038 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 DMTNQ08495 405 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 BFSP1Q12934 665 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 MAPK7Q13164 816 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 SF3A2Q15428 464 aaKnown RBP7.49□□□□□ -1.21
CKS1B-205ENST00000473344 CCDC6Q16204 474 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 SLC39A12Q504Y0 691 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 CC2D1AQ6P1N0 951 aaPredicted RBP7.49□□□□□ -1.21
CKS1B-205ENST00000473344 GAREM2Q75VX8 874 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 METTL23Q86XA0 190 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 THEM5Q8N1Q8 247 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 IPO4Q8TEX9 1081 aaKnown RBP7.49□□□□□ -1.21
CKS1B-205ENST00000473344 GAB3Q8WWW8 586 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 TSPAN18Q96SJ8 248 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 TASP1Q9H6P5 420 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
CKS1B-205ENST00000473344 KCND2Q9NZV8 630 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 HSFX1Q9UBD0 423 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 DSEQ9UL01 958 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 CACNA1IQ9P0X4 2223 aa7.49□□□□□ -1.21
CKS1B-205ENST00000473344 SPEGQ15772 3267 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CEP250Q9BV73 2442 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CCDC163A0A0D9SF12 145 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 LACTBL1A8MY62 500 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 TULP1O00294 542 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 OGTO15294 1046 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 EXTL3O43909 919 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 ZNF500O60304 480 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 VNN2O95498 520 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 PRAMEF12O95522 483 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SCP2P22307 547 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 WEE1P30291 646 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 PRPHP41219 470 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 TNFSF9P41273 254 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 LILRA4P59901 499 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CYP4F8P98187 520 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 RUNX3Q13761 415 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 ELF2Q15723 593 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 ZBTB6Q15916 424 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 N4BP2L1Q5TBK1 243 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 STPG1Q5TH74 334 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SPATA1Q5VX52 437 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 KCNK18Q7Z418 384 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 HSCBQ8IWL3 235 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CD302Q8IX05 232 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SCUBE3Q8IX30 993 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 CAMKK1Q8N5S9 505 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 TTC9BQ8N6N2 239 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SYT2Q8N9I0 419 aaPredicted RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 C2orf15Q8WU43 125 aaKnown RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SENP8Q96LD8 212 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 LRRC3BQ96PB8 259 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 NOTCH4Q99466 2003 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 PLIN2Q99541 437 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 MKNK1Q9BUB5 465 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 MSTO1Q9BUK6 570 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 TSPYL1Q9H0U9 437 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 SMG9Q9H0W8 520 aaKnown RBP7.48□□□□□ -1.21
CKS1B-205ENST00000473344 VPS45Q9NRW7 570 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 GKN1Q9NS71 199 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 C2orf42Q9NWW7 574 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 ZMYM5Q9UJ78 669 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 PCDHGA5Q9Y5G8 931 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 TICRRQ7Z2Z1 1910 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 FRYQ5TBA9 3013 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 EPG5Q9HCE0 2579 aa7.48□□□□□ -1.21
CKS1B-205ENST00000473344 GPR179Q6PRD1 2367 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 COL4A2P08572 1712 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 K7ENM7 598 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 AKAP3O75969 853 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RHOBTB1O94844 696 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 EPN2O95208 641 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 KRT18P05783 430 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 PLA2G4BP0C869 781 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 DRD1P21728 446 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 DDX6P26196 483 aaKnown RBP eCLIP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 U2AF2P26368 475 aaKnown RBP eCLIP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ABCD1P33897 745 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 MPLP40238 635 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RAP1GAPP47736 663 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 RPIAP49247 311 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TOB1P50616 345 aaPredicted RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 GUCY2FP51841 1108 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 CDR1P51861 262 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 NCKAP1LP55160 1127 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 FAM193AP78312 1265 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ST3GAL1Q11201 340 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 SMARCB1Q12824 385 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TMEM132DQ14C87 1099 aa7.47□□□□□ -1.21
CKS1B-205ENST00000473344 KARSQ15046 597 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
CKS1B-205ENST00000473344 TMEM196Q5HYL7 178 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms