RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TBC1D4O60343 1298 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 CCDC130P13994 396 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 PCSK1P29120 753 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 CDK17Q00537 523 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 FMO1Q01740 532 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 DSG1Q02413 1049 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 RAB30Q15771 203 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 INTS6LQ5JSJ4 861 aaKnown RBP20.41■□□□□ 0.86
PSPC1-203ENST00000471658 CYP26C1Q6V0L0 522 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 RAD9BQ6WBX8 426 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 PALB2Q86YC2 1186 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 FMNL3Q8IVF7 1028 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 GLYCTKQ8IVS8 523 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 TNIP3Q96KP6 325 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 PCDHB18PQ96TA0 734 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 PKMYT1Q99640 499 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 PLVAPQ9BX97 442 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 RWDD3Q9Y3V2 267 aa20.41■□□□□ 0.86
PSPC1-203ENST00000471658 CHD9Q3L8U1 2897 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 NLRC5Q86WI3 1866 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 CLDN5O00501 218 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 GRM6O15303 877 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 GLUD2P49448 558 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 ARPP19P56211 112 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 ERVFC1P60507 584 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 CDR2Q01850 454 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 PSMD5Q16401 504 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 SGO2Q562F6 1265 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 ZNF280DQ6N043 979 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 ANKS3Q6ZW76 656 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 TMTC1Q8IUR5 882 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 POF1BQ8WVV4 589 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 PIK3R5Q8WYR1 880 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 CYFIP2Q96F07 1278 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.4■□□□□ 0.867e-6■□□□□ 8.3
PSPC1-203ENST00000471658 ZBP1Q9H171 429 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 BZW2Q9Y6E2 419 aaKnown RBP20.4■□□□□ 0.86
PSPC1-203ENST00000471658 PLXNA4Q9HCM2 1894 aa20.4■□□□□ 0.86
PSPC1-203ENST00000471658 O00370 1275 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 DDX3XO00571 662 aaKnown RBP eCLIP20.39■□□□□ 0.869e-10■□□□□ 11.3
PSPC1-203ENST00000471658 RB1P06400 928 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 TNFAIP3P21580 790 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.86
PSPC1-203ENST00000471658 ASTE1Q2TB18 679 aaPredicted RBP20.39■□□□□ 0.86
PSPC1-203ENST00000471658 PPP2R2DQ66LE6 453 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 SMYD5Q6GMV2 418 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 DENND1BQ6P3S1 775 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 FAM171BQ6P995 826 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 PAQR9Q6ZVX9 377 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 DNAAF5Q86Y56 855 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 PASD1Q8IV76 773 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 B3GNT5Q9BYG0 378 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 ZCWPW1Q9H0M4 648 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 SPTLC3Q9NUV7 552 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 SEPT11Q9NVA2 429 aaKnown RBP20.39■□□□□ 0.86
PSPC1-203ENST00000471658 ADAMTS1Q9UHI8 967 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 KIAA1257Q9ULG3 409 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 COLQQ9Y215 455 aaPredicted RBP20.39■□□□□ 0.86
PSPC1-203ENST00000471658 PCDHGC5Q9Y5F6 944 aa20.39■□□□□ 0.86
PSPC1-203ENST00000471658 H7C4K7 107 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 MICAL2O94851 1124 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 URODP06132 367 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 ADORA2BP29275 332 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 TSPY1Q01534 308 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CNGA2Q16280 664 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 FBXO22Q8NEZ5 403 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 UBA3Q8TBC4 463 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 MYCBPAPQ8TBZ2 947 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SLC2A14Q8TDB8 520 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 ARNTL2Q8WYA1 636 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CCDC42Q96M95 316 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CLSTN3Q9BQT9 956 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 RHOBTB2Q9BYZ6 727 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SLC28A3Q9HAS3 691 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 MTRRQ9UBK8 725 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CDY1Q9Y6F8 540 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CHD7Q9P2D1 2997 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 A0A087X0T9 212 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SSU72P8A0A1W2PR75 194 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 OR6C75A6NL08 312 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 LILRB3O75022 631 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 FAM228BP0C875 321 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CTSAP10619 480 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 GFPT1Q06210 699 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-203ENST00000471658 GPM6BQ13491 265 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 CAMK1Q14012 370 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 GOLGA7BQ2TAP0 167 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SLC39A12Q504Y0 691 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 ARHGAP17Q68EM7 881 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 TMC7Q7Z402 723 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 FUKQ8N0W3 1084 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SLC30A5Q8TAD4 765 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 MYLPFQ96A32 169 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 PCED1BQ96HM7 432 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 SAMD11Q96NU1 681 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 C11orf84Q9BUA3 381 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-203ENST00000471658 DEF6Q9H4E7 631 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 TSPAN16Q9UKR8 245 aa20.38■□□□□ 0.85
PSPC1-203ENST00000471658 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.38■□□□□ 0.85
PSPC1-203ENST00000471658 EPOPA6NHQ4 379 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms