RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 MAPK13O15264 365 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 EXOC3O60645 756 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 KIF20AO95235 890 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 CST3P01034 146 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 TNNC2P02585 160 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 LRG1P02750 347 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 NR3C1P04150 777 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 RHOP08100 348 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PTPN2P17706 415 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 SMARCB1Q12824 385 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 DUSP4Q13115 394 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 MTMR3Q13615 1198 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 SLC5A9Q2M3M2 681 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 SOWAHAQ2M3V2 549 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PABPC1LQ4VXU2 614 aaKnown RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 COBLL1Q53SF7 1204 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PRSS36Q5K4E3 855 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 METTL23Q86XA0 190 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 TMEM86AQ8N2M4 240 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PDCL2Q8N4E4 241 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 ATAD1Q8NBU5 361 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 ITFG1Q8TB96 612 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 FGF13Q92913 245 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 CCDC47Q96A33 483 aaKnown RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 CCDC127Q96BQ5 260 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 GSDMAQ96QA5 445 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 FNBP1Q96RU3 617 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 SPSB2Q99619 263 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PKMYT1Q99640 499 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 LRRC3Q9BY71 257 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 DNAJC25Q9H1X3 360 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 CEP72Q9P209 647 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
COL4A6-205ENST00000468338 PCDHB9Q9Y5E1 797 aa11.98□□□□□ -0.49
COL4A6-205ENST00000468338 TMEM221A6NGB7 291 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 M0R296 226 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 KRT19P08727 400 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 FAM163BP0C2L3 166 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 DLATP10515 647 aaKnown RBP11.97□□□□□ -0.49
COL4A6-205ENST00000468338 TNNI1P19237 187 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 GBP2P32456 591 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-205ENST00000468338 CASP4P49662 377 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 ENPEPQ07075 957 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 TWF1Q12792 350 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 PNOCQ13519 176 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 TDGQ13569 410 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 HTR4Q13639 388 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 HFE2Q6ZVN8 426 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL4A6-205ENST00000468338 GET4Q7L5D6 327 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-205ENST00000468338 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 C2orf15Q8WU43 125 aaKnown RBP11.97□□□□□ -0.49
COL4A6-205ENST00000468338 HPDLQ96IR7 371 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 PGLYRP2Q96PD5 576 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 ACBD6Q9BR61 282 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 XYLT2Q9H1B5 865 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 SMOC2Q9H3U7 446 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 POLIQ9UNA4 740 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 YIPF1Q9Y548 306 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 SNX9Q9Y5X1 595 aa11.97□□□□□ -0.49
COL4A6-205ENST00000468338 IKBKBO14920 756 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
COL4A6-205ENST00000468338 HUS1O60921 280 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 MOSPD3O75425 235 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 DXOO77932 396 aaKnown RBP11.96□□□□□ -0.49
COL4A6-205ENST00000468338 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.49
COL4A6-205ENST00000468338 CCR2P41597 374 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 LHX1P48742 406 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 AP3M2P53677 418 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 BFSP1Q12934 665 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 PLD1Q13393 1074 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 C1orf220Q5T0J3 134 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 OSTM1Q86WC4 334 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 SLC44A3Q8N4M1 653 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 TTC9BQ8N6N2 239 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 SPPL2BQ8TCT7 592 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 RSAD2Q8WXG1 361 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 ZNF512Q96ME7 567 aaPredicted RBP11.96□□□□□ -0.49
COL4A6-205ENST00000468338 TMLHEQ9NVH6 421 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 GDE1Q9NZC3 331 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 CHMP5Q9NZZ3 219 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 DUSP12Q9UNI6 340 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 MAPK8IP1Q9UQF2 711 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 MRPS23Q9Y3D9 190 aaKnown RBP11.96□□□□□ -0.49
COL4A6-205ENST00000468338 ASB3Q9Y575 518 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 PCDHA5Q9Y5H7 936 aa11.96□□□□□ -0.49
COL4A6-205ENST00000468338 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 ZNF197O14709 1029 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 GADD45BO75293 160 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms