RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 S1PR5Q9H228 398 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 FAM124BQ9H5Z6 455 aaPredicted RBP15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 CISHQ9NSE2 258 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 ZDHHC7Q9NXF8 308 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 PCDHB5Q9Y5E4 795 aa15.42■□□□□ 0.06
DNMT3A-208ENST00000466601 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 CILPO75339 1184 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 RFPL2O75678 378 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 HOXA9P31269 272 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 YWHAEP62258 255 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 TFF2Q03403 129 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 CCDC142Q17RM4 750 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 LEXMQ3ZCV2 418 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 MDH1BQ5I0G3 518 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 FKBP15Q5T1M5 1219 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 PHLDB3Q6NSJ2 640 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 APTXQ7Z2E3 356 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 ACOT1Q86TX2 421 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 SPATA2LQ8IUW3 424 aaPredicted RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 CRYBG2Q8N1P7 616 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 B3GALNT2Q8NCR0 500 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 CMASQ8NFW8 434 aaPredicted RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 MYCBPAPQ8TBZ2 947 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 WHAMMQ8TF30 809 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 LPIN3Q9BQK8 851 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 NT5C1AQ9BXI3 368 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 CRISPLD1Q9H336 500 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 ABI2Q9NYB9 513 aaPredicted RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 HSFX1Q9UBD0 423 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 HMGXB4Q9UGU5 601 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 SLC27A5Q9Y2P5 690 aa15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 MTCL1Q9Y4B5 1905 aaKnown RBP15.41■□□□□ 0.06
DNMT3A-208ENST00000466601 LGALS16A8MUM7 142 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 HNRNPA1P09651 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 TUFMP49411 452 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 GCNT1Q02742 428 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 ITIH3Q06033 890 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 ORC1Q13415 861 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 MGAT5BQ3V5L5 792 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 ZNF394Q53GI3 561 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 TTC9BQ8N6N2 239 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 SMRP1Q8NCR6 262 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 KAT5Q92993 513 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 MYLPFQ96A32 169 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 PCED1BQ96HM7 432 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 FAM81BQ96LP2 452 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 TWNKQ96RR1 684 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 PRKD2Q9BZL6 878 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 ELOVL4Q9GZR5 314 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 ADAM7Q9H2U9 754 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 APEX2Q9UBZ4 518 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 INSL5Q9Y5Q6 135 aa15.4■□□□□ 0.06
DNMT3A-208ENST00000466601 REV3LO60673 3130 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 CCL16O15467 120 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 MBTPS2O43462 519 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 PAPLNO95428 1278 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 LRG1P02750 347 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 HAPLN1P10915 354 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 MFAP3P55082 362 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 APBA1Q02410 837 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 TWF1Q12792 350 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 SMAD4Q13485 552 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 AAK1Q2M2I8 961 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 CFAP221Q4G0U5 840 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 FILIP1LQ4L180 1135 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 GJB7Q6PEY0 223 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 CYP26C1Q6V0L0 522 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 ENOSF1Q7L5Y1 443 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 GPR149Q86SP6 731 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 UBR7Q8N806 425 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 ZNF707Q96C28 371 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 TMEM176AQ96HP8 235 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 FUBP3Q96I24 572 aaKnown RBP eCLIP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 KREMEN1Q96MU8 473 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 SEPT5Q99719 369 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 ABCB6Q9NP58 842 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 SIX2Q9NPC8 291 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 YIPF1Q9Y548 306 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 PCDHB4Q9Y5E5 795 aa15.39■□□□□ 0.05
DNMT3A-208ENST00000466601 GRXCR2A6NFK2 248 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 XYLBO75191 536 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 SOAT2O75908 522 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 SERPINC1P01008 464 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 ACO1P21399 889 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 CYP2F1P24903 491 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 ALDH1A3P47895 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms