RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 UBE2Q2Q8WVN8 375 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 LRRC19Q9H756 370 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 FAM204AQ9H8W3 233 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 TULP2O00295 520 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 SPTLC1O15269 473 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 HSF2BPO75031 334 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 KRT10P13645 584 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
VAPB-203ENST00000463370 HSD17B3P37058 310 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
VAPB-203ENST00000463370 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 CNGA2Q16280 664 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 GDF6Q6KF10 455 aaPredicted RBP13.54□□□□□ -0.24
VAPB-203ENST00000463370 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 PIWIL1Q96J94 861 aaKnown RBP13.54□□□□□ -0.24
VAPB-203ENST00000463370 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 DERAQ9Y315 318 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 MEIS3P2A8K0S8 358 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 PFKMP08237 780 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 VDRP11473 427 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 KRT3P12035 628 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 PLTPP55058 493 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 GJA9P57773 515 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 TTMPQ5BVD1 217 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 CFAP58Q5T655 872 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 ALS2CLQ60I27 953 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 OR2W6PQ8NHA6 318 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 DPEP3Q9H4B8 488 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 METTL5Q9NRN9 209 aaKnown RBP13.54□□□□□ -0.24
VAPB-203ENST00000463370 IPPQ9Y573 584 aa13.54□□□□□ -0.24
VAPB-203ENST00000463370 SIGLEC16A6NMB1 481 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 CTSHP09668 335 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 FCGRTP55899 365 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
VAPB-203ENST00000463370 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 MFSD7Q6UXD7 560 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 BEST2Q8NFU1 509 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 EXD1Q8NHP7 514 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.24
VAPB-203ENST00000463370 RAPGEF5Q92565 580 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 OSBPL8Q9BZF1 889 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 AOC2O75106 756 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 HMGCRP04035 888 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 IL1R2P27930 398 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 AXLP30530 894 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 FNTAP49354 379 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 ZFP42Q96MM3 310 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 SLITRK1Q96PX8 696 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 FMO2Q99518 471 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
VAPB-203ENST00000463370 DCLK3Q9C098 648 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 PLAAQ9Y263 795 aa13.53□□□□□ -0.24
VAPB-203ENST00000463370 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 H0YGN5 161 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 PIRO00625 290 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 TP73O15350 636 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 LRCH4O75427 683 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 KRT1P04264 644 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 FGFR1P11362 822 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 GNAT1P11488 350 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 PSMA2P25787 234 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 CCND3P30281 292 aaPredicted RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 RGS7P49802 495 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 TRIP13Q15645 432 aaPredicted RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 SMTNL2Q2TAL5 461 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 GOLGA7BQ2TAP0 167 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 RAB6CQ53S08 254 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 KAZNQ674X7 775 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.24
VAPB-203ENST00000463370 LCLAT1Q6UWP7 414 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms