RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 TRIM42Q8IWZ5 723 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 C4orf33Q8N1A6 199 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 NIPA2Q8N8Q9 360 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 ZNF483Q8TF39 744 aaPredicted RBP13.51□□□□□ -0.25
LINC00473-202ENST00000455853 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 BICD1Q96G01 975 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 NSL1Q96IY1 281 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 PKD2L1Q9P0L9 805 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 USTQ9Y2C2 406 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 LRCH1Q9Y2L9 728 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 STYXL1Q9Y6J8 313 aa13.51□□□□□ -0.25
LINC00473-202ENST00000455853 E7ESA3 106 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SPAG6O75602 509 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 LINGO3P0C6S8 592 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ATP4AP20648 1035 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CAP2P40123 477 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 AP3M2P53677 418 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 UGCGQ16739 394 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 FKBP1CQ5VVH2 108 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 NAIF1Q69YI7 327 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 PPFIBP2Q8ND30 876 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 APBB2Q92870 758 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 DENND2DQ9H6A0 471 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ZMYND8Q9ULU4 1186 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 PCDHA10Q9Y5I2 948 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SNCAIPQ9Y6H5 919 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 IQANK1A0A1B0GTG1 560 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 HGSO14964 777 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 EGFRP00533 1210 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 KRT4P19013 534 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MMP8P22894 467 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 DSG3P32926 999 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 LIG4P49917 911 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ARFIP2P53365 341 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MXRA7P84157 204 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CDK18Q07002 472 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SPP2Q13103 211 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CBLBQ13191 982 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ZFYVE27Q5T4F4 411 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 BANPQ8N9N5 519 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 IL31RAQ8NI17 732 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SLC35B2Q8TB61 432 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ZNF333Q96JL9 665 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 FAM167BQ9BTA0 163 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MAK16Q9BXY0 300 aaKnown RBP13.5□□□□□ -0.25
LINC00473-202ENST00000455853 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 NPHS2Q9NP85 383 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
LINC00473-202ENST00000455853 SGK1O00141 431 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 KLF11O14901 512 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 WDR46O15213 610 aaKnown RBP13.49□□□□□ -0.25
LINC00473-202ENST00000455853 CBX6O95503 412 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 PIGRP01833 764 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 GM2AP17900 193 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 TNNI1P19237 187 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 GJC1P36383 396 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 CDK16Q00536 496 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 DNAJC24Q6P3W2 148 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 PRUNE1Q86TP1 453 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 MTDHQ86UE4 582 aaKnown RBP13.49□□□□□ -0.25
LINC00473-202ENST00000455853 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 GPRASP2Q96D09 838 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 PTCD3Q96EY7 689 aaKnown RBP13.49□□□□□ -0.25
LINC00473-202ENST00000455853 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 CCDC28BQ9BUN5 200 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 TSSK1BQ9BXA7 367 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 SYNCQ9H7C4 482 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 ZNF212Q9UDV6 495 aa13.49□□□□□ -0.25
LINC00473-202ENST00000455853 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
LINC00473-202ENST00000455853 FAM155BO75949 473 aa13.48□□□□□ -0.25
LINC00473-202ENST00000455853 CDKN2BP42772 138 aa13.48□□□□□ -0.25
LINC00473-202ENST00000455853 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
LINC00473-202ENST00000455853 PGM5Q15124 567 aa13.48□□□□□ -0.25
LINC00473-202ENST00000455853 GSTA3Q16772 222 aa13.48□□□□□ -0.25
LINC00473-202ENST00000455853 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
LINC00473-202ENST00000455853 KAZNQ674X7 775 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms