RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PSMD2Q13200 908 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 TFDP1Q14186 410 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 MXD4Q14582 209 aaPredicted RBP8.67□□□□□ -1.02
LINC01961-201ENST00000449954 GON4LQ3T8J9 2241 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 COLEC12Q5KU26 742 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 LRRK2Q5S007 2527 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 LRCH2Q5VUJ6 765 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 ABCA12Q86UK0 2595 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 TMTC2Q8N394 836 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 OR2I1PQ8NGU4 316 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 LENG9Q96B70 501 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 CDC6Q99741 560 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 LRRC3Q9BY71 257 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 ZDHHC5Q9C0B5 715 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 FBRSL1Q9HCM7 1045 aaKnown RBP8.67□□□□□ -1.02
LINC01961-201ENST00000449954 HPS4Q9NQG7 708 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 GKN1Q9NS71 199 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 BARHL2Q9NY43 387 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 MMP17Q9ULZ9 603 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 TBX20Q9UMR3 447 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 YIPF1Q9Y548 306 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 MYO16Q9Y6X6 1858 aa8.67□□□□□ -1.02
LINC01961-201ENST00000449954 PTPRDP23468 1912 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 NBPF19A0A087WUL8 3843 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 A0A1B0GUA9 196 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 A0A1W2PQD8 194 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CCDC69A6NI79 296 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 MSH4O15457 936 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 DKC1O60832 514 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC01961-201ENST00000449954 GP1BBP13224 206 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 EPHB3P54753 998 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 PSMC5P62195 406 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CYP4A11Q02928 519 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 MBTD1Q05BQ5 628 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 SMAD1Q15797 465 aaKnown RBP8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CRY1Q16526 586 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 PREPLQ4J6C6 727 aaPredicted RBP8.66□□□□□ -1.02
LINC01961-201ENST00000449954 GPR158Q5T848 1215 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 PLA2G4FQ68DD2 849 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 ZNF280DQ6N043 979 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 NFXL1Q6ZNB6 911 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CPA6Q8N4T0 437 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 BAHD1Q8TBE0 780 aaPredicted RBP8.66□□□□□ -1.02
LINC01961-201ENST00000449954 SPATA18Q8TC71 538 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CD101Q93033 1021 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 TMEM143Q96AN5 459 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 ARID3AQ99856 593 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 POLR3CQ9BUI4 534 aaPredicted RBP8.66□□□□□ -1.02
LINC01961-201ENST00000449954 NFKBIZQ9BYH8 718 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 ATXN3LQ9H3M9 355 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 EBF3Q9H4W6 596 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 KIF9Q9HAQ2 790 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 SUSD2Q9UGT4 822 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 IL17BQ9UHF5 180 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 FBXL5Q9UKA1 691 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 ASB3Q9Y575 518 aa8.66□□□□□ -1.02
LINC01961-201ENST00000449954 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 OTOL1A6NHN0 477 aaPredicted RBP8.65□□□□□ -1.02
LINC01961-201ENST00000449954 MARCH6O60337 910 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 RECQL4O94761 1208 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 ZNF883P0CG24 379 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CPB1P15086 417 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CLCNKBP51801 687 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 ANTXR2P58335 489 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CXADRP78310 365 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.02
LINC01961-201ENST00000449954 EMC2Q15006 297 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 PDGFRLQ15198 375 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 UPP1Q16831 310 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CTXN3Q4LDR2 81 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 C2orf27AQ580R0 203 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CASC1Q6TDU7 716 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 SLC36A4Q6YBV0 504 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 GAREM2Q75VX8 874 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 FMNL3Q8IVF7 1028 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 REXO1Q8N1G1 1221 aaKnown RBP8.65□□□□□ -1.02
LINC01961-201ENST00000449954 USP33Q8TEY7 942 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 RLN3Q8WXF3 142 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
LINC01961-201ENST00000449954 CEP170P1Q96L14 293 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 GCNAQ96QF7 691 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 FAM124BQ9H5Z6 455 aaPredicted RBP8.65□□□□□ -1.02
LINC01961-201ENST00000449954 TASP1Q9H6P5 420 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 KCNK4Q9NYG8 393 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 ANKMY1Q9P2S6 941 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
LINC01961-201ENST00000449954 FLNCQ14315 2725 aa8.65□□□□□ -1.03
LINC01961-201ENST00000449954 E7EWF7 191 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TBX3O15119 743 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 FLRT2O43155 660 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 B4GALT5O43286 388 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TLX3O43711 291 aaPredicted RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 PSMD10O75832 226 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 CYP21A2P08686 494 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 RXRAP19793 462 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms