RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 M0R2N6 131 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TBC1D12O60347 775 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 EDF1O60869 148 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 PEX11AO75192 247 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TBX10O75333 385 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 SLC1A1P43005 524 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ABCG1P45844 678 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TUBP50607 506 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MAPK10P53779 464 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TRABD2AQ86V40 505 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MFN1Q8IWA4 741 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MCOLN2Q8IZK6 566 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 DEFB107AQ8IZN7 70 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MAB21L3Q8N8X9 362 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 DCAF4Q8WV16 495 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 OXNAD1Q96HP4 312 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ZNF395Q9H8N7 513 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TUFT1Q9NNX1 390 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ATRNO75882 1429 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MEIS2O14770 477 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 EIF3DO15371 548 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 FAM155BO75949 473 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 AMPD1P23109 780 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 NLRP11P59045 1033 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 PHEXP78562 749 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 UBAP2LQ14157 1087 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 CCNG2Q16589 344 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 MAPK6Q16659 721 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 DENND5BQ6ZUT9 1274 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 RNF135Q8IUD6 432 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GLIS1Q8NBF1 620 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 NETO2Q8NC67 525 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ADAM7Q9H2U9 754 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 XAB2Q9HCS7 855 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GSC2O15499 205 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 ABL2P42684 1182 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 RPS6P62753 249 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 C4orf50Q6ZRC1 276 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 RIPOR1Q6ZS17 1223 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 SEMA4DQ92854 862 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 DCUN1D5Q9BTE7 237 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 CADM1Q9BY67 442 aaKnown RBP12.97□□□□□ -0.33
UBE3B-204ENST00000449510 CEP41Q9BYV8 373 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 DNAJC16Q9Y2G8 782 aa12.97□□□□□ -0.33
UBE3B-204ENST00000449510 BBOX1O75936 387 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 MT-CO1P00395 513 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 FGRP09769 529 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 FAM200BP0CF97 657 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 NEK3P51956 506 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 ROR1Q01973 937 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 UTS2BQ765I0 119 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 OTOP1Q7RTM1 612 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 SLFN11Q7Z7L1 901 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 ARHGAP18Q8N392 663 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 MAN1C1Q9NR34 630 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 OLFML3Q9NRN5 406 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 STARD13Q9Y3M8 1113 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 CYB561D2O14569 222 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 NDC80O14777 642 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 PROSCO94903 275 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 RFX1P22670 979 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 NUMBP49757 651 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 PDK4Q16654 411 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 PTAR1Q7Z6K3 402 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBE3B-204ENST00000449510 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 EXT2Q93063 718 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 RNF34Q969K3 372 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 EME1Q96AY2 570 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
UBE3B-204ENST00000449510 A6NJR5 290 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 KBTBD13C9JR72 458 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 CLPTM1O96005 669 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 ADRB2P07550 413 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 POLD1P28340 1107 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 PSMC5P62195 406 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms