RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 NACC1Q96RE7 527 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ECSITQ9BQ95 431 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 PCDH18Q9HCL0 1135 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SAR1AQ9NR31 198 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 KRT82Q9NSB4 513 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 TMCO1Q9UM00 188 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 FRMPD4Q14CM0 1322 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 GEMIN4P57678 1058 aaKnown RBP12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SLC25A3Q00325 362 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ALCAMQ13740 583 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 DOK7Q18PE1 504 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 RHBDF2Q6PJF5 856 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ZCCHC23Q6ZST2 131 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 POMGNT1Q8WZA1 660 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SEMA4DQ92854 862 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 OXNAD1Q96HP4 312 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SIKE1Q9BRV8 207 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 TUBB6Q9BUF5 446 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 STX18Q9P2W9 335 aaKnown RBP12.26□□□□□ -0.45
SMPD4-209ENST00000439886 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 COPEO14579 308 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 SMARCA1P28370 1054 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 HOXD12P35452 270 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 HDAC4P56524 1084 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 OCRLQ01968 901 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 IYDQ6PHW0 289 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 RBM15BQ8NDT2 890 aaKnown RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 FAM20AQ96MK3 541 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 SPATA16Q9BXB7 569 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 C1orf112Q9NSG2 853 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 ZNF212Q9UDV6 495 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 LGALS13Q9UHV8 139 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 SH3GLB1Q9Y371 365 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 MEIS2O14770 477 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 PPP4CP60510 307 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 CDK16Q00536 496 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 BTG3Q14201 252 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 FBXO36Q8NEA4 188 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 FAM136AQ96C01 138 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 TTC25Q96NG3 672 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 GCNAQ96QF7 691 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 ACCSQ96QU6 501 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 IFT122Q9HBG6 1241 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 OLFML3Q9NRN5 406 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 MTO1Q9Y2Z2 717 aaKnown RBP12.25□□□□□ -0.45
SMPD4-209ENST00000439886 PCDHB4Q9Y5E5 795 aa12.25□□□□□ -0.45
SMPD4-209ENST00000439886 E2F8A0AVK6 867 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 TMEM221A6NGB7 291 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SPATA31D3P0C874 917 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 GZMAP12544 262 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 STIP1P31948 543 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 AQP5P55064 265 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 TCHHL1Q5QJ38 904 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SPATA31D4Q6ZUB0 917 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SYDE1Q6ZW31 735 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 MIER3Q7Z3K6 550 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 RSPH3Q86UC2 560 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 MAP7D3Q8IWC1 876 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 ZCCHC9Q8N567 271 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 AGR3Q8TD06 166 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 GLT8D2Q9H1C3 349 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SENP1Q9P0U3 644 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SPO11Q9Y5K1 396 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 RNASEH1O60930 286 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 PSMD7P51665 324 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 PTK7Q13308 1070 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 ITGA7Q13683 1181 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 UBAP2LQ14157 1087 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 ACAP1Q15027 740 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 WDR44Q5JSH3 913 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SPOPLQ6IQ16 392 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 TMEM53Q6P2H8 277 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 MARK2Q7KZI7 788 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 APLFQ8IW19 511 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 ZC3H3Q8IXZ2 948 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 GSDMBQ8TAX9 411 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 DDX4Q9NQI0 724 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 UNCXA6NJT0 531 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 TP73O15350 636 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 MAP3K6O95382 1288 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 OXCT1P55809 520 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms