RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PABPC1LQ4VXU2 614 aaKnown RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 TSTD2Q5T7W7 516 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 RNF219Q5W0B1 726 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 PTF1AQ7RTS3 328 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 TOR1AIP2Q8NFQ8 470 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 SSH1Q8WYL5 1049 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 LPIN2Q92539 896 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 PGBD1Q96JS3 809 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 ASH1LQ9NR48 2969 aaKnown RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 SAP30BPQ9UHR5 308 aaKnown RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 STXBP5LQ9Y2K9 1186 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 PREX2Q70Z35 1606 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 MROH1Q8NDA8 1641 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 SPTBN4Q9H254 2564 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 CFAP47Q6ZTR5 3102 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 TOP2AP11388 1531 aaKnown RBP3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 ASXL1Q8IXJ9 1541 aa3.9□□□□□ -1.79
HMGB1P18-201ENST00000438801 TNRQ92752 1358 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 TRIM75PA6NK02 468 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ADM5C9JUS6 153 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 SUN1O94901 812 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 VIL1P09327 827 aaKnown RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ELFN1P0C7U0 828 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ATF3P18847 181 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ANXA11P50995 505 aaKnown RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 CDC42EP1Q00587 391 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 CLUL1Q15846 466 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 PREPLQ4J6C6 727 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 SDE2Q6IQ49 451 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 MIGA2Q7L4E1 593 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ADGRG5Q8IZF4 528 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 NSUN7Q8NE18 718 aaKnown RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 IL17RDQ8NFM7 739 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 IFI44Q8TCB0 444 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 KLHL32Q96NJ5 620 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 JKAMPQ9P055 326 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 TMA7Q9Y2S6 64 aaKnown RBP3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 PCDHA13Q9Y5I0 950 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 PXDNLA1KZ92 1463 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 PZPP20742 1482 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 PTPN13Q12923 2485 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 KIF7Q2M1P5 1343 aa3.89□□□□□ -1.79
HMGB1P18-201ENST00000438801 ABCA6Q8N139 1617 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 NKTRP30414 1462 aaKnown RBP3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 ANKRD17O75179 2603 aaKnown RBP3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 CCDC195A0A1B0GUA6 201 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 WIPF3A6NGB9 483 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 MANSC4A6NHS7 340 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 TOR1BO14657 336 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 NDUFS2O75306 463 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 CHRM2P08172 466 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 TXNRD1Q16881 649 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 FLYWCH1Q4VC44 716 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 GIMAP6Q6P9H5 292 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 MICALCLQ6ZW33 695 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF365Q70YC5 407 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 CFAP52Q8N1V2 620 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 ATL2Q8NHH9 583 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 MYCBPAPQ8TBZ2 947 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 HASPINQ8TF76 798 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 SNX19Q92543 992 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 DDX17Q92841 729 aaKnown RBP3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 HDAC10Q969S8 669 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 C1QTNF7Q9BXJ2 289 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 PACSIN1Q9BY11 444 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 TUBD1Q9UJT1 453 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 WNT6Q9Y6F9 365 aa3.88□□□□□ -1.79
HMGB1P18-201ENST00000438801 RANBP2P49792 3224 aaKnown RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 CENPFP49454 3210 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 LINC00473A8K010 186 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 SGTAO43765 313 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 SLC43A1O75387 559 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 CLSTN1O94985 981 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 PPP3CBP16298 524 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 ITPKBP27987 946 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF81P51508 661 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF280AP59817 542 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 MC2RQ01718 297 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 EXOSC10Q01780 885 aaKnown RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 ITIH3Q06033 890 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 PIGFQ07326 219 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 HLXQ14774 488 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 KIAA1614Q5VZ46 1190 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 C1QL2Q7Z5L3 287 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 AMIGO2Q86SJ2 522 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 B3GALNT2Q8NCR0 500 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 TMIEQ8NEW7 156 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 DDB2Q92466 427 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 DPF1Q92782 380 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 LRIG1Q96JA1 1093 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF778Q96MU6 729 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 FAM126AQ9BYI3 521 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 IMPG2Q9BZV3 1241 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 STK32BQ9NY57 414 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 SLC45A2Q9UMX9 530 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 TPRP12270 2363 aaKnown RBP3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 C10orf71Q711Q0 1435 aa3.87□□□□□ -1.79
HMGB1P18-201ENST00000438801 PTPRUQ92729 1446 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms