RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ZNF609O15014 1411 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ZBED6P86452 979 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 UAP1L1Q3KQV9 507 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 POM121L1PQ3SYA9 428 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ZBTB41Q5SVQ8 909 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 ZNF410Q86VK4 478 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 MCEEQ96PE7 176 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
UBE3B-203ENST00000434735 HDCP19113 662 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 PORCNQ9H237 461 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 CYP39A1Q9NYL5 469 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 NFKBIEO00221 500 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 AXLP30530 894 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 PRKAA1Q13131 559 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 KRT31Q15323 416 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 TMA16Q96EY4 203 aaKnown RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 NFASCO94856 1347 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 PGRMC1O00264 195 aaKnown RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 FOSL2P15408 326 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 SESN2P58004 480 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.37
UBE3B-203ENST00000434735 TCF25Q9BQ70 676 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
UBE3B-203ENST00000434735 ATG16L1Q676U5 607 aa12.71□□□□□ -0.38
UBE3B-203ENST00000434735 PHF20Q9BVI0 1012 aa12.71□□□□□ -0.38
UBE3B-203ENST00000434735 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.38
UBE3B-203ENST00000434735 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 NPTX2P47972 431 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 GNGT1P63211 74 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 FBXL19Q6PCT2 694 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 CENPUQ71F23 418 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 EDEM1Q92611 657 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 FBXO44Q9H4M3 255 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 GTSE1Q9NYZ3 720 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 CCNYL1Q8N7R7 359 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 CEP72Q9P209 647 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SLC37A4O43826 429 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SESN3P58005 492 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 APBA1Q02410 837 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 C1QTNF7Q9BXJ2 289 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 EXO5Q9H790 373 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 C17orf75Q9HAS0 396 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 GAKO14976 1311 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PXDNQ92626 1479 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 ZNF263O14978 683 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 ACOX1Q15067 660 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 EPC2Q52LR7 807 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SETBP1Q9Y6X0 1596 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SUN1O94901 812 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 CFIP05156 583 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 MYBL1P10243 752 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SREBF1P36956 1147 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 TAP1Q03518 808 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 GRIK5Q16478 980 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PKN3Q6P5Z2 889 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBE3B-203ENST00000434735 SELENONQ9NZV5 590 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 PCDHGB4Q9UN71 923 aa12.7□□□□□ -0.38
UBE3B-203ENST00000434735 KCNN4O15554 427 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 DYRK3O43781 588 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 AMD1P17707 334 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
UBE3B-203ENST00000434735 ART3Q13508 389 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
UBE3B-203ENST00000434735 SLC26A7Q8TE54 656 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 ING5Q8WYH8 240 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 RUSC1Q9BVN2 902 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 METTL5Q9NRN9 209 aaKnown RBP12.69□□□□□ -0.38
UBE3B-203ENST00000434735 DDX56Q9NY93 547 aaKnown RBP12.69□□□□□ -0.38
UBE3B-203ENST00000434735 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
UBE3B-203ENST00000434735 SLIT1O75093 1534 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms