RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 TAGAPQ8N103 731 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 EMC1Q8N766 993 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 SRPK1Q96SB4 655 aaKnown RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 PNKPQ96T60 521 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 PRMT1Q99873 361 aaKnown RBP10.17□□□□□ -0.78
SNX13-203ENST00000428135 CEP41Q9BYV8 373 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 CATSPERBQ9H7T0 1116 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 UBP1Q9NZI7 540 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 KIF17Q9P2E2 1029 aa10.17□□□□□ -0.78
SNX13-203ENST00000428135 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 FOXN3O00409 490 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 CD44P16070 742 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 ZNF177Q13360 481 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 PTGISQ16647 500 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 KLHDC7AQ5VTJ3 777 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 C1orf146Q5VVC0 180 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 RBM15Q96T37 977 aaKnown RBP eCLIP10.16□□□□□ -0.784e-7■■□□□ 11.6
SNX13-203ENST00000428135 OSBPL8Q9BZF1 889 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 CCDC90BQ9GZT6 254 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 NUDT5Q9UKK9 219 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 KIF13AQ9H1H9 1805 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 A0A1B0GTH6 734 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 OGTO15294 1046 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ATG4AQ8WYN0 398 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ARHGEF26Q96DR7 871 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 NEU2Q9Y3R4 380 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 SLC12A8A0AV02 714 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 A8MX80 341 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ZNF197O14709 1029 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 FGFR2P21802 821 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 KLRC2P26717 231 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 DSG3P32926 999 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 MDM2Q00987 491 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 RAD9BQ6WBX8 426 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 FAM131BQ86XD5 332 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 RAB42Q8N4Z0 105 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 PCSK9Q8NBP7 692 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 FEZF2Q8TBJ5 459 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 SEPT8Q92599 483 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 UNKQ9C0B0 810 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 MYPNQ86TC9 1320 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 EIF3DO15371 548 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX13-203ENST00000428135 VIL1P09327 827 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 SLC1A1P43005 524 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 CAV1Q03135 178 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 BYSLQ13895 437 aaKnown RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 C6orf10Q5SRN2 563 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 FOPNLQ96NB1 174 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 IL1RL2Q9HB29 575 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 KIF20BQ96Q89 1820 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ELNP15502 786 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 MZF1P28698 734 aaPredicted RBP10.16□□□□□ -0.78
SNX13-203ENST00000428135 CCL23P55773 120 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 SP3Q02447 781 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 CUL3Q13618 768 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ZNF484Q5JVG2 852 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ADAM32Q8TC27 787 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX13-203ENST00000428135 KCND2Q9NZV8 630 aa10.16□□□□□ -0.78
SNX13-203ENST00000428135 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 ARFIP2P53365 341 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 KDSRQ06136 332 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 BTG3Q14201 252 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 GJC2Q5T442 439 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 MRPS31Q92665 395 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 FAM161BQ96MY7 647 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 V9GYQ6 96 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 ADCY3O60266 1144 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 GYPCP04921 128 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 ALDH2P05091 517 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 OCM2P0CE71 109 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 OCMP0CE72 109 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 TOB1P50616 345 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 GUCY1A3Q02108 690 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 GIT2Q14161 759 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 NR1I3Q14994 352 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 STILQ15468 1287 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 TAF11Q15544 211 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 FSCBQ5H9T9 825 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 CXCL17Q6UXB2 119 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 RD3Q7Z3Z2 195 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 TFAP2DQ7Z6R9 452 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 IFNEQ86WN2 208 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 HMX1Q9NP08 348 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 RBM12Q9NTZ6 932 aaKnown RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PCDHGB4Q9UN71 923 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 ALG6Q9Y672 507 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
SNX13-203ENST00000428135 SREBF1P36956 1147 aa10.15□□□□□ -0.78
SNX13-203ENST00000428135 PPP2R2AP63151 447 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms