RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PRRG1O14668 218 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 APBA1Q02410 837 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 DUSP4Q13115 394 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 NFE2Q16621 373 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-209ENST00000425836 CCDC149Q6ZUS6 474 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 C2orf15Q8WU43 125 aaKnown RBP26.11■■□□□ 1.77
VEGFA-209ENST00000425836 TWNKQ96RR1 684 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 FAM124BQ9H5Z6 455 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-209ENST00000425836 SFXN1Q9H9B4 322 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 CD207Q9UJ71 328 aa26.11■■□□□ 1.77
VEGFA-209ENST00000425836 LGALS16A8MUM7 142 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 TPM4P67936 248 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 GCNT1Q02742 428 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 TFF2Q03403 129 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 ORC1Q13415 861 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 RARS2Q5T160 578 aaKnown RBP26.1■■□□□ 1.77
VEGFA-209ENST00000425836 DPY19L2P1Q6NXN4 242 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 RTL10Q7L3V2 364 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 ACOT1Q86TX2 421 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 CRYBG2Q8N1P7 616 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 TTC39CQ8N584 583 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 UBR7Q8N806 425 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 B3GALNT2Q8NCR0 500 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 FEZF2Q8TBJ5 459 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 MYCBPAPQ8TBZ2 947 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 TNIP3Q96KP6 325 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 SIX2Q9NPC8 291 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 ZDHHC7Q9NXF8 308 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 SLC27A5Q9Y2P5 690 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 PCDHB5Q9Y5E4 795 aa26.1■■□□□ 1.77
VEGFA-209ENST00000425836 GOLGA6L19H0YKK7 550 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 PAPLNO95428 1278 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 MAPRE1Q15691 268 aaKnown RBP26.09■■□□□ 1.77
VEGFA-209ENST00000425836 MDH1BQ5I0G3 518 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 PPM1LQ5SGD2 360 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 FKBP15Q5T1M5 1219 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 TMC5Q6UXY8 1006 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 TTC9BQ8N6N2 239 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 SMRP1Q8NCR6 262 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 CMASQ8NFW8 434 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-209ENST00000425836 SPPL2BQ8TCT7 592 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 KREMEN1Q96MU8 473 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 NT5C1AQ9BXI3 368 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 ELOVL4Q9GZR5 314 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 UBE2TQ9NPD8 197 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-209ENST00000425836 ABI2Q9NYB9 513 aaPredicted RBP26.09■■□□□ 1.77
VEGFA-209ENST00000425836 HSFX1Q9UBD0 423 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 PRUNE2Q8WUY3 3088 aa26.09■■□□□ 1.77
VEGFA-209ENST00000425836 CCDC195A0A1B0GUA6 201 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 LEXMQ3ZCV2 418 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 GJB7Q6PEY0 223 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 MYLPFQ96A32 169 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 PCED1BQ96HM7 432 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 ADAM7Q9H2U9 754 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 THEGQ9P2T0 379 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 APEX2Q9UBZ4 518 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 INSL5Q9Y5Q6 135 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 PLXNA3P51805 1871 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 XIRP2A4UGR9 3374 aa26.08■■□□□ 1.77
VEGFA-209ENST00000425836 ACO1P21399 889 aaKnown RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 HOXA9P31269 272 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 YWHAEP62258 255 aaKnown RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 ZNF394Q53GI3 561 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 SPATA2LQ8IUW3 424 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 ZNF707Q96C28 371 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 PRKD2Q9BZL6 878 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 HNRNPA1P09651 372 aaKnown RBP eCLIP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 HAPLN1P10915 354 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 ITIH3Q06033 890 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 C4orf50Q6ZRC1 276 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 RNF214Q8ND24 703 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 ABCB6Q9NP58 842 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 YIPF1Q9Y548 306 aa26.07■■□□□ 1.76
VEGFA-209ENST00000425836 SPTBN5Q9NRC6 3674 aaKnown RBP26.07■■□□□ 1.76
VEGFA-209ENST00000425836 SOAT2O75908 522 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 CYP2F1P24903 491 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 TUFMP49411 452 aaKnown RBP26.06■■□□□ 1.76
VEGFA-209ENST00000425836 RAD23BP54727 409 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 CYP27A1Q02318 531 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 UBXN1Q04323 297 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 MGAT5BQ3V5L5 792 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 CFAP221Q4G0U5 840 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 ENOSF1Q7L5Y1 443 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 GPR149Q86SP6 731 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 C12orf29Q8N999 325 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 TMEM176AQ96HP8 235 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 FUBP3Q96I24 572 aaKnown RBP eCLIP26.06■■□□□ 1.76
VEGFA-209ENST00000425836 SEPT5Q99719 369 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-209ENST00000425836 LSM14BQ9BX40 385 aaKnown RBP26.06■■□□□ 1.76
VEGFA-209ENST00000425836 B3GNT5Q9BYG0 378 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 RHOBTB2Q9BYZ6 727 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 CDH22Q9UJ99 828 aa26.06■■□□□ 1.76
VEGFA-209ENST00000425836 CCL16O15467 120 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 TWF1Q12792 350 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 KLHDC7AQ5VTJ3 777 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 SLC4A11Q8NBS3 891 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 JAKMIP2Q96AA8 810 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 FAM81BQ96LP2 452 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 NAP1L5Q96NT1 182 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms