RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 PORCNQ9H237 461 aa17.75■□□□□ 0.43
SYNGAP1-202ENST00000418600 MED24O75448 989 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 VDRP11473 427 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 HTRA3P83110 453 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 ORC1Q13415 861 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 LBRQ14739 615 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 PHACTR4Q8IZ21 702 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 UHMK1Q8TAS1 419 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 TRIM9Q9C026 710 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 LRRC53A6NM62 1247 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 TXNDC9O14530 226 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 KAZALD1Q96I82 304 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 MCEEQ96PE7 176 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 BFARQ9NZS9 450 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 BTBD7Q9P203 1132 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 NR2E1Q9Y466 385 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 AHDC1Q5TGY3 1603 aaPredicted RBP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 LPPQ93052 612 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 MRFAP1L1Q96HT8 127 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 ZBTB18Q99592 522 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 AASDHPPTQ9NRN7 309 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 METTL5Q9NRN9 209 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 ERVK-10P10266 1014 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 PYROXD1Q8WU10 500 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 HPS3Q969F9 1004 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 CYFIP2Q96F07 1278 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 RASSF4Q9H2L5 321 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 COG4Q9H9E3 785 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 CRLS1Q9UJA2 301 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 KCPQ6ZWJ8 1503 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 ZNF263O14978 683 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 CTSEP14091 401 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 MMS22LQ6ZRQ5 1243 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 ABRAQ8N0Z2 381 aa17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYNGAP1-202ENST00000418600 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 TRIM42Q8IWZ5 723 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 SLC25A41Q8N5S1 370 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 LGALS16A8MUM7 142 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 GSTA4O15217 222 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 RTN2O75298 545 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 CDR2Q01850 454 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 TMEM86AQ8N2M4 240 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 ATP11CQ8NB49 1132 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 KNDC1Q76NI1 1749 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 CUL2Q13617 745 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 TEKT4Q8WW24 435 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 IFNA8P32881 189 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 TLE2Q04725 743 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 NALCNQ8IZF0 1738 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 CCL16O15467 120 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 SLC10A3P09131 477 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 GRIK3Q13003 919 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
SYNGAP1-202ENST00000418600 ACKR2O00590 384 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 ENDOD1O94919 500 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 ARL4CP56559 192 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 PTK7Q13308 1070 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 COL1A2P08123 1366 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 NDUFS3O75489 264 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 LRGUKQ96M69 825 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 UNC93B1Q9H1C4 597 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 SLC39A10Q9ULF5 831 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 GIT1Q9Y2X7 761 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 ATP9BO43861 1147 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 F9P00740 461 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 CDC25CP30307 473 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 HIRAP54198 1017 aaPredicted RBP17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 ZRANB3Q5FWF4 1079 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 TPGS1Q6ZTW0 290 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 SPATS2Q86XZ4 545 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 WTIPA6NIX2 430 aaPredicted RBP17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 GOLGA8KD6RF30 607 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 ARVCFO00192 962 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 SPATA31D3P0C874 917 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 SPATA31D4Q6ZUB0 917 aa17.72■□□□□ 0.43
SYNGAP1-202ENST00000418600 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 CBX4O00257 560 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 LUC7L3O95232 432 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 RFC2P35250 354 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 CPSF2Q9P2I0 782 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 RECQL4O94761 1208 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 ADH1CP00326 375 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 ACAT1P24752 427 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 TKTL1P51854 596 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 TBX4P57082 545 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 PTRHD1Q6GMV3 140 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 PDZD8Q8NEN9 1154 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 EPC1Q9H2F5 836 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 P4HA2O15460 535 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms