RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPG21Q9NZD8 308 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 IL17BQ9UHF5 180 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 V9GYY5 206 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 LOXHD1Q8IVV2 1947 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 C2CD3Q4AC94 2353 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 TRAV20A0A0B4J274 112 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GOLGA6CA6NDK9 693 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GOLGA6BA6NDN3 693 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PAPSS2O95340 614 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CXCL14O95715 111 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GOLGA6DP0CG33 693 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CYP2D6P10635 497 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GNAT1P11488 350 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 USP8P40818 1118 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 STAT2P52630 851 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 RWDD2BP57060 319 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 ADCY2Q08462 1091 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 MGAT3Q09327 533 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 BIRC2Q13490 618 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GIT2Q14161 759 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 TTC31Q49AM3 519 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 FILIP1LQ4L180 1135 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 FBXO47Q5MNV8 452 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CAVIN1Q6NZI2 390 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 KCNT2Q6UVM3 1135 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PCSK4Q6UW60 755 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 SLC30A10Q6XR72 485 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM214BQ7L5A3 538 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 KBTBD6Q86V97 674 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 FMNL3Q8IVF7 1028 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 EFCAB13Q8IY85 973 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 ARHGEF39Q8N4T4 335 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 BVESQ8NE79 360 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 ANKRD20A12PQ8NF67 263 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CMASQ8NFW8 434 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GAB3Q8WWW8 586 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 OSBP2Q969R2 916 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 UTP4Q969X6 686 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PPP1R14AQ96A00 147 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 SYAP1Q96A49 352 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 NEUROD6Q96NK8 337 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 RPP25Q9BUL9 199 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 RHOBTB2Q9BYZ6 727 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PRDM14Q9GZV8 571 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PCDH12Q9NPG4 1184 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 TCP11L1Q9NUJ3 509 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 GOLGA6AQ9NYA3 693 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 WHRNQ9P202 907 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CCPG1Q9ULG6 757 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 NDRG2Q9UN36 371 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 EMC9Q9Y3B6 208 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 PCDHB7Q9Y5E2 793 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 LAMA5O15230 3695 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 FBN2P35556 2912 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 CFAP46Q8IYW2 2715 aa6.1□□□□□ -1.43
ECHDC1-206ENST00000417628 ZMYM2Q9UBW7 1377 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 TSC2P49815 1807 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 hCG_2014768A0A024R1R8 64 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 CCDC163A0A0D9SF12 145 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM95CA0A1B0GW59 222 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 TMCO5BA8MYB1 307 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 K7ESF4 209 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 MYO1CO00159 1063 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 PPM1BO75688 479 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 RPP40O75818 363 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 CCDC192P0DO97 292 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 FGFR1P11362 822 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 C6P13671 934 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 POU3F2P20265 443 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 CALML3P27482 149 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 CD52P31358 61 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 DDIT3P35638 169 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 PBX3P40426 434 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 ALDH7A1P49419 539 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 NUCB2P80303 420 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 AMPD3Q01432 767 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 IKQ13123 557 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 TMED1Q13445 227 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 WTAPQ15007 396 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 KLHL40Q2TBA0 621 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 TAF1BQ53T94 588 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 WWC2Q6AWC2 1192 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 PARM1Q6UWI2 310 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 MTSS1LQ765P7 747 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 RSPH3Q86UC2 560 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 RTN4RL1Q86UN2 441 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM160B2Q86V87 743 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 SPEM1Q8N4L4 309 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 DNERQ8NFT8 737 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 FGF14Q92915 247 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 BRF1Q92994 677 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 SCARF2Q96GP6 870 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms