RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 PCGF5Q86SE9 256 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.25□□□□□ -1.09
EPHA4-203ENST00000409938 KIRREL3Q8IZU9 778 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 MAF1Q9H063 256 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 KCNK13Q9HB14 408 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 KLHL11Q9NVR0 708 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 KCNG1Q9UIX4 513 aa8.25□□□□□ -1.09
EPHA4-203ENST00000409938 IGKV6D-21A0A0A0MT36 114 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 KRT1P04264 644 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 NR3C2P08235 984 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 NAMPTP43490 491 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ACOT2P49753 483 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 LIG4P49917 911 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 NEK3P51956 506 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TGFB2P61812 414 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 GAD2Q05329 585 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 PIGHQ14442 188 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SETDB1Q15047 1291 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ARHGEF16Q5VV41 709 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ANKRD22Q5VYY1 191 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 CHSY1Q86X52 802 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 C4orf33Q8N1A6 199 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TEX9Q8N6V9 391 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SKA1Q96BD8 255 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 VPS11Q9H270 941 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 RBAKQ9NYW8 714 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 CNTN3Q9P232 1028 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ZNF148Q9UQR1 794 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TGDSO95455 350 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 PTPN4P29074 926 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 GDF10P55107 478 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ACTR2P61160 394 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 EMC2Q15006 297 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 EFTUD2Q15029 972 aaKnown RBP eCLIP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SWSAP1Q6NVH7 229 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 LVRNQ6Q4G3 990 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 CCDC125Q86Z20 511 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ZBED8Q8IZ13 594 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 CPXCR1Q8N123 301 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 AGBL3Q8NEM8 1001 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 LRRC8CQ8TDW0 803 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ZBTB45Q96K62 511 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TMEM121Q9BTD3 319 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 NIFKQ9BYG3 293 aaKnown RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 DENND2DQ9H6A0 471 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ANKFY1Q9P2R3 1169 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ABLIM1O14639 778 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 BANF1O75531 89 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 LDHAP00338 332 aaKnown RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SUPT20HL2P0C7V6 817 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 KRT4P19013 534 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TNNI1P19237 187 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SLC18A2Q05940 514 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 PDIA2Q13087 525 aaKnown RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 BAATQ14032 418 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 SUPT20HL1Q3ZLR7 823 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TAF1BQ53T94 588 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 XKR3Q5GH77 459 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 BBS12Q6ZW61 710 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 LONP2Q86WA8 852 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 PPIL6Q8IXY8 311 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 FNIP1Q8TF40 1166 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 NAF1Q96HR8 494 aaKnown RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 FNBP1Q96RU3 617 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 TRIM6Q9C030 488 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-203ENST00000409938 USTQ9Y2C2 406 aa8.24□□□□□ -1.09
EPHA4-203ENST00000409938 ZSWIM8A7E2V4 1837 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 POC1B-GALNT4F8VUJ3 575 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 SMAPO00193 183 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 STAM2O75886 525 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 LUC7L3O95232 432 aaKnown RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 CBX6O95503 412 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 CST3P01034 146 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 ATP6V1C1P21283 382 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 CA4P22748 312 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 EPHB2P29323 1055 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 OAZ1P54368 228 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 NCOA4Q13772 614 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 TFDP1Q14186 410 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 NAA25Q14CX7 972 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 TARBP2Q15633 366 aaKnown RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 HIF1AQ16665 826 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 NLRP9Q7RTR0 991 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 BRSK2Q8IWQ3 736 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 KIAA0319LQ8IZA0 1049 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 PTPRN2Q92932 1015 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 ALKBH8Q96BT7 664 aaKnown RBP8.23□□□□□ -1.09
EPHA4-203ENST00000409938 FAM136AQ96C01 138 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 MCEEQ96PE7 176 aa8.23□□□□□ -1.09
EPHA4-203ENST00000409938 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms