RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 FLOT2Q14254 428 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 LPIN1Q14693 890 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 C6orf89Q6UWU4 347 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 RNF19BQ6ZMZ0 732 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 ATL2Q8NHH9 583 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 TPCN2Q8NHX9 752 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 PTPRN2Q92932 1015 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 TRIM9Q9C026 710 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 NRDE2Q9H7Z3 1164 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 TRIM39Q9HCM9 518 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SAR1AQ9NR31 198 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 CTNNAL1Q9UBT7 734 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 AURKCQ9UQB9 309 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 REXO2Q9Y3B8 237 aaKnown RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SSC5DA1L4H1 1573 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 MROH7Q68CQ1 1323 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 ARHGEF35A5YM69 484 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 GOLGA8IPA6NC78 632 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 CFAP99D6REC4 459 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 GOLGA8TH3BQL2 631 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 RNF225M0QZC1 329 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 AKAP10O43572 662 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 NDUFB5O43674 189 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 PRKAB2O43741 272 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 TRMUO75648 421 aaKnown RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 RHOBTB3O94955 611 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 KLHL2O95198 593 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SKIV2L2P42285 1042 aaKnown RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SARSP49591 514 aaKnown RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 CLCN2P51788 898 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 DRAP1Q14919 205 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 RNF43Q68DV7 783 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SLC51AQ86UW1 340 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 FAM178BQ8IXR5 827 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 SAMD3Q8N6K7 520 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 OR6Y1Q8NGX8 325 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 RNF25Q96BH1 459 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 CMTM5Q96DZ9 223 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 DDX56Q9NY93 547 aaKnown RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 PSMC3IPQ9P2W1 217 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-203ENST00000406072 ALG6Q9Y672 507 aa6.13□□□□□ -1.43
HDAC9-203ENST00000406072 PVALEFA0A1B0GWK0 134 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 WDR64B1ANS9 1081 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KLRF2D3W0D1 207 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FCHO1O14526 889 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FANCGO15287 622 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 RIPK2O43353 540 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PEX1O43933 1283 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 BCL10O95999 233 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KRT1P04264 644 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ANPEPP15144 967 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CD19P15391 556 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PLOD1Q02809 727 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CYP4A11Q02928 519 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TROAPQ12815 778 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 STX3Q13277 289 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SGSM1Q2NKQ1 1148 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KHDC1Q4VXA5 237 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ZNF618Q5T7W0 954 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CIAPIN1Q6FI81 312 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 DNAAF5Q86Y56 855 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TPH2Q8IWU9 490 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 GIMAP8Q8ND71 665 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SUN5Q8TC36 379 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ALKBH8Q96BT7 664 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 VPS50Q96JG6 964 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NAP1L4Q99733 375 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TMEM120AQ9BXJ8 343 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 WNT8AQ9H1J5 351 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FAM96AQ9H5X1 160 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TIMMDC1Q9NPL8 285 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 FBXO9Q9UK97 447 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 DSEQ9UL01 958 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ESYT2A0FGR8 921 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 DDX3XO00571 662 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NFIBO00712 420 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ASNA1O43681 348 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CNOT3O75175 753 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CCDC130P13994 396 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SHMT1P34896 483 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 MAPK10P53779 464 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 SLC12A2P55011 1212 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 STX1BP61266 288 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 CTTNQ14247 550 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PRPSAP1Q14558 356 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 HADHQ16836 314 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ITPRIPL1Q6GPH6 555 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TLDC1Q6P9B6 456 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TLK2Q86UE8 772 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ZCCHC7Q8N3Z6 543 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 EIF1ADQ8N9N8 165 aaKnown RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 ZNF564Q8TBZ8 553 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-203ENST00000406072 TBCKQ8TEA7 893 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 KIFC3Q9BVG8 833 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 PKD2L1Q9P0L9 805 aa6.12□□□□□ -1.43
HDAC9-203ENST00000406072 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms