RNA–Protein interactions for RNA: ENST00000403714.7

EFR3B-204, Transcript of EFR3 homolog B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EFR3B, Length 7,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-204ENST00000403714 SLC39A12Q504Y0 691 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 SHCBP1LQ9BZQ2 653 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
EFR3B-204ENST00000403714 GOLGA8KD6RF30 607 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 AP3M2P53677 418 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 PREPLQ4J6C6 727 aaPredicted RBP11.24□□□□□ -0.61
EFR3B-204ENST00000403714 ARHGAP9Q9BRR9 750 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
EFR3B-204ENST00000403714 TRDMT1O14717 391 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 CHI3L1P36222 383 aaPredicted RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ERVK-24P63145 666 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 VGLL4Q14135 290 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SERPINI1Q99574 410 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 DDX56Q9NY93 547 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SNX8Q9Y5X2 465 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 NCK2O43639 380 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 STIP1P31948 543 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ELMO3Q96BJ8 720 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SERAC1Q96JX3 654 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 LMBRD1Q9NUN5 540 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ATP6V1HQ9UI12 483 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 STAU1O95793 577 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 C16orf72Q14CZ0 275 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 MTBPQ96DY7 904 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 PSEN2P49810 448 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SKOR1P84550 965 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 FBXL19Q6PCT2 694 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 RUVBL2Q9Y230 463 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 A0A087X0T9 212 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 YWHAQP27348 245 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ACTN3Q08043 901 aaPredicted RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 FAAH2Q6GMR7 532 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 OVOS1Q6IE37 1185 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 ZNF558Q96NG5 402 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SEC24DO94855 1032 aaPredicted RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 LRRC8AQ8IWT6 810 aa11.23□□□□□ -0.61
EFR3B-204ENST00000403714 GEMIN8Q9NWZ8 242 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
EFR3B-204ENST00000403714 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 SSH2Q76I76 1423 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 C2orf81A6NN90 581 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 RHOT1Q8IXI2 618 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 TASP1Q9H6P5 420 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ZNHIT2Q9UHR6 403 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ACRP10323 421 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 INSRRP14616 1297 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 EPHB4P54760 987 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 YWHAZP63104 245 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 IFT88Q13099 833 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.612e-8■■■■■ 72.2
EFR3B-204ENST00000403714 KLHL29Q96CT2 875 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 SGF29Q96ES7 293 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 PADI4Q9UM07 663 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 TCOF1Q13428 1488 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 F8W810 466 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 NFIBO00712 420 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 SRP72O76094 671 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 IL1BP01584 269 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 IFNA16P05015 189 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 MSH3P20585 1137 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 CLEC16AQ2KHT3 1053 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 PLEKHM3Q6ZWE6 761 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 CENPTQ96BT3 561 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 RNF103-CHMP3A0A140T963 221 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ORC4O43929 436 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 NFICP08651 508 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 DET1Q7L5Y6 550 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 EML4Q9HC35 981 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 CFIP05156 583 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 NCKAP1LP55160 1127 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ZBED6P86452 979 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 LUZP2Q86TE4 346 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 BCAS4Q8TDM0 211 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 OGFRQ9NZT2 677 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
EFR3B-204ENST00000403714 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
EFR3B-204ENST00000403714 KPNA6O60684 536 aa11.21□□□□□ -0.61
EFR3B-204ENST00000403714 RPSAP08865 295 aaKnown RBP11.21□□□□□ -0.61
EFR3B-204ENST00000403714 GCKP35557 465 aa11.21□□□□□ -0.61
EFR3B-204ENST00000403714 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms