RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	EPHB4	P54760	987 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MKRN4P	Q13434	485 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CDH18	Q13634	790 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ULK2	Q8IYT8	1036 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SEC16B	Q96JE7	1060 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HIST1H2AH	Q96KK5	128 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SLITRK1	Q96PX8	696 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HIST1H2AJ	Q99878	128 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	H2AFJ	Q9BTM1	129 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	IMPAD1	Q9NX62	359 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MINPP1	Q9UNW1	487 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SIK3	Q9Y2K2	1263 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ITIH6	Q6UXX5	1313 aa		11.58	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MYPN	Q86TC9	1320 aa		11.58	□□□□□ -0.55
CACNA1C-218	ENST00000399644		A0A087WWV3	80 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PFKFB1	P16118	471 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MSANTD1	Q6ZTZ1	278 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FMO2	Q99518	471 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PRKD2	Q9BZL6	878 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EPC1	Q9H2F5	836 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZBTB40	Q9NUA8	1239 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PCDH8	O95206	1070 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KCNA3	P22001	575 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HSPA9	P38646	679 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GCLC	P48506	637 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STX4	Q12846	297 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZNF786	Q8N393	782 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TSPAN14	Q8NG11	270 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCDC115	Q96NT0	180 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MTA3	Q9BTC8	594 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CAAP1	Q9H8G2	361 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SNX14	Q9Y5W7	946 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PFAS	O15067	1338 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KRT33A	O76009	404 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLA2G4B	P0C869	781 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TCP1	P17987	556 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RNASE12	Q5GAN4	147 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STRIP1	Q5VSL9	837 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LRRC70	Q7Z2Q7	622 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLEKHM2	Q8IWE5	1019 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CLYBL	Q8N0X4	340 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RNF25	Q96BH1	459 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CUEDC2	Q9H467	287 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FANCL	Q9NW38	375 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZNF222	Q9UK12	451 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PGRMC1	O00264	195 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PGK2	P07205	417 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EIF2B2	P49770	351 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HIC1	Q14526	733 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HLF	Q16534	295 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RD3	Q7Z3Z2	195 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PARP9	Q8IXQ6	854 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GRAMD1C	Q8IYS0	662 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SCFD2	Q8WU76	684 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BTBD9	Q96Q07	612 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KIAA1586	Q9HCI6	787 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ERAP1	Q9NZ08	941 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BTBD3	Q9Y2F9	522 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	USP1	O94782	785 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DDN	O94850	711 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IFNA14	P01570	189 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FGR	P09769	529 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DSG3	P32926	999 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PGM1	P36871	562 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LGALS3BP	Q08380	585 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KLHL32	Q96NJ5	620 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	JPH1	Q9HDC5	661 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C8orf4	Q9NR00	106 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CYP39A1	Q9NYL5	469 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SNX24	Q9Y343	169 aa		11.58	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SLC16A4	O15374	487 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TPST1	O60507	370 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	XYLB	O75191	536 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CKM	P06732	381 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ADD1	P35611	737 aa	Known RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MYBPC2	Q14324	1141 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C10orf120	Q5SQS8	335 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SMIM5	Q71RC9	77 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDIK1L	Q8N165	341 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CASP10	Q92851	521 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STAMBPL1	Q96FJ0	436 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LATS2	Q9NRM7	1088 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NDOR1	Q9UHB4	597 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZBTB5	O15062	677 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NOS3	P29474	1203 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PRMT1	Q99873	361 aa	Known RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ABCG4	Q9H172	646 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ASNSD1	Q9NWL6	643 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IL1RAPL1	Q9NZN1	696 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SAMD9	Q5K651	1589 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ABCB1	P08183	1280 aa	Predicted RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	S100A1	P23297	94 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FBXO42	Q6P3S6	717 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CEP95	Q96GE4	821 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KRT37	O76014	449 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NKX2-3	Q8TAU0	364 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms