RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 YY1P25490 414 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 GPR141Q7Z602 305 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 KIAA1586Q9HCI6 787 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 TDRKHQ9Y2W6 561 aaKnown RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PCDHB7Q9Y5E2 793 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CNTN1Q12860 1018 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 STARD3Q14849 445 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PARP8Q8N3A8 854 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 KCNB2Q92953 911 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 POLR1BQ9H9Y6 1135 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PIH1D1Q9NWS0 290 aaKnown RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 USP15Q9Y4E8 981 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SUPT7LO94864 414 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 NPTXRO95502 500 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ERVK-10P10266 1014 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ITGA8P53708 1063 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF618Q5T7W0 954 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 APOL2Q9BQE5 337 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 GNG14A0A1W2PPG7 69 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 NOS3P29474 1203 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-202ENST00000394947 ATL2Q8NHH9 583 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 CCT8L2Q96SF2 557 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SERHL2Q9H4I8 314 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 SERHLQ9NQF3 203 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM120BA0PK00 339 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CHURC1-FNTBB4DL54 471 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SMAPO00193 183 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 LPIN1Q14693 890 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 ST13P5Q8NFI4 369 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 DPF2Q92785 391 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 NOL6Q9H6R4 1146 aaKnown RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 VTA1Q9NP79 307 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 GMFGO60234 142 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 WLSQ5T9L3 541 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SYTL1Q8IYJ3 562 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 DPP10Q8N608 796 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CHST12Q9NRB3 414 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 UBAP1Q9NZ09 502 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 H2AFYO75367 372 aaKnown RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 RRM2P31350 389 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CDH18Q13634 790 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 RNF44Q7L0R7 432 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 FAM111AQ96PZ2 611 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF624Q9P2J8 865 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 PSMD11O00231 422 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 MRPS35P82673 323 aaKnown RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 DSG1Q02413 1049 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 GRAPQ13588 217 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SEPHS2Q99611 448 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 NDOR1Q9UHB4 597 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 KLHL20Q9Y2M5 609 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 VWA5AO00534 786 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 PHF2O75151 1096 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
SIN3A-202ENST00000394947 STAT4Q14765 748 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 FAM153AQ9UHL3 310 aa12.72□□□□□ -0.37
SIN3A-202ENST00000394947 SAC3D1A6NKF1 404 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 KIF28PB7ZC32 967 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 KRT16P08779 473 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 PSMB9P28065 219 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 IL5RAQ01344 420 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 CUL4AQ13619 759 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 TRADDQ15628 312 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 IQCF2Q8IXL9 164 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 DDHD1Q8NEL9 900 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms