RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 LRRC27Q9C0I9 530 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TNKS2Q9H2K2 1166 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 EPB41L4BQ9H329 900 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CLSTN2Q9H4D0 955 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 LY9Q9HBG7 655 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PREBQ9HCU5 417 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CNGB3Q9NQW8 809 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PRDM5Q9NQX1 630 aaPredicted RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 KCNQ5Q9NR82 932 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 GINM1Q9NU53 330 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM39AQ9NV64 488 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SLC5A4Q9NY91 659 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SLAMF8Q9P0V8 285 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 ZSWIM5Q9P217 1185 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 HESX1Q9UBX0 185 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 STK39Q9UEW8 545 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CDC23Q9UJX2 597 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 DSEQ9UL01 958 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 ZNRF3Q9ULT6 936 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 HPCAL4Q9UM19 191 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CNPY2Q9Y2B0 182 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 INPP5FQ9Y2H2 1132 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF711Q9Y462 761 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SPO11Q9Y5K1 396 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 FADS3Q9Y5Q0 445 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SNX11Q9Y5W9 270 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CITO14578 2027 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 GRIN2DO15399 1336 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 SYNGAP1Q96PV0 1343 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PITPNM2Q9BZ72 1349 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 STK36Q9NRP7 1315 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ARPC4-TTLL3A0A0A6YYG9 625 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CLRN2A0PK11 232 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 MAGEA13PA6NCF6 341 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PRR33A8MZF0 331 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 TCP10L2B9ZVM9 353 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 E7EVH7 732 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 BOLA2-SMG1P6H3BVE0 249 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 GCOM1H8Y6P7 765 aaPredicted RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 RBAK-RBAKDNI3L0D1 243 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 AP5Z1O43299 807 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 IDH3BO43837 385 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 JAK2O60674 1132 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 B3GALNT1O75752 331 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PDE5AO76074 875 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 DEXIO95424 95 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 STAMBPO95630 424 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 SYF2O95926 243 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CBX7O95931 251 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CTSHP09668 335 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 FGRP09769 529 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 RHOXF2BP0C7M4 288 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ATP6V1C1P21283 382 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 RPS12P25398 132 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ATP5DP30049 168 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 GSTT1P30711 240 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 MAN1A1P33908 653 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PHBP35232 272 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 HSPA9P38646 679 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CETN2P41208 172 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CDK8P49336 464 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PCYT1AP49585 367 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 MXI1P50539 228 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PDE6CP51160 858 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CCNG1P51959 295 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CACNB3P54284 484 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 GEMIN4P57678 1058 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ELF3P78545 371 aaPredicted RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CDK17Q00537 523 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 TFAP4Q01664 338 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ARID5AQ03989 594 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 MRPL28Q13084 256 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 MSLNQ13421 630 aaPredicted RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 TNFAIP1Q13829 316 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 HLTFQ14527 1009 aaKnown RBP eCLIP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 KPNB1Q14974 876 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PPP2R5BQ15173 497 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 SEC23AQ15436 765 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 KCNA10Q16322 511 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PTGISQ16647 500 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 GSTA3Q16772 222 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ACCSLQ4AC99 568 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 SMUG1Q53HV7 270 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ANKRD20A2Q5SQ80 823 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ANKRD20A1Q5TYW2 823 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 ANKRD20A3Q5VUR7 823 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PCNX4Q63HM2 1172 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 TWF2Q6IBS0 349 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 NCAPH2Q6IBW4 605 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 APOBEC3HQ6NTF7 200 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 HIBCHQ6NVY1 386 aaPredicted RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 RUFY4Q6ZNE9 571 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 RBM43Q6ZSC3 357 aaKnown RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 TTLL10Q6ZVT0 673 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 DPH6Q7L8W6 267 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 C11orf96Q7Z7L8 435 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 CABP7Q86V35 215 aa2.79□□□□□ -1.96
TRAV41-201ENST00000390468 PNMA8AQ86V59 439 aaPredicted RBP2.79□□□□□ -1.96
TRAV41-201ENST00000390468 VPS36Q86VN1 386 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms