RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 CHP2O43745 196 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF862O60290 1169 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 GGPS1O95749 300 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 FDX1P10109 184 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 KCNA3P22001 575 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 EIF2S3P41091 472 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 CBX5P45973 191 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 QARSP47897 775 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 ERFP50548 548 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ADRM1Q16186 407 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 FAM83EQ2M2I3 478 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ARL6IP4Q66PJ3 421 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 SPACA7Q96KW9 195 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 EPB41L4BQ9H329 900 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF302Q9NR11 478 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 AHSPQ9NZD4 102 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PNMA8CA0A1B0GUJ8 204 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 KIF1CO43896 1103 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 PALMO75781 387 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 UPP2O95045 317 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 FCER1AP12319 257 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TCN1P20061 433 aaPredicted RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 RASA1P20936 1047 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF846Q147U1 533 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 LRRC14Q15048 493 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF57Q68EA5 555 aaPredicted RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 LAYNQ6UX15 382 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PROM2Q8N271 834 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TRMT6Q9UJA5 497 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 DYRK1BQ9Y463 629 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 V9GYQ6 96 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 BCLAF3A2AJT9 711 aaKnown RBP11.04□□□□□ -0.64
RTN3-206ENST00000377819 H7C1W4 665 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ECE2O60344 883 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 PDE9AO76083 593 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 PDE8BO95263 885 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 LCP1P13796 627 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ACADLP28330 430 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CRKP46108 304 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 RAB2AP61019 212 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 GPSM2P81274 684 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 BTKQ06187 659 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SEMA3FQ13275 785 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CCNG2Q16589 344 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ERMARDQ5T6L9 678 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SPATA21Q7Z572 469 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CEP72Q9P209 647 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ENOPH1Q9UHY7 261 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ARHGEF40Q8TER5 1519 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 TNRQ92752 1358 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 A0A0B4J269 797 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ACSL4O60488 711 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SPAG6O75602 509 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 PDGFRAP16234 1089 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 STIP1P31948 543 aaKnown RBP11.04□□□□□ -0.64
RTN3-206ENST00000377819 NUDT2P50583 147 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 TUBB3Q13509 450 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ZSWIM7Q19AV6 140 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CCDC137Q6PK04 289 aaKnown RBP11.04□□□□□ -0.64
RTN3-206ENST00000377819 G2E3Q7L622 706 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 R3HCC1LQ7Z5L2 792 aaKnown RBP11.04□□□□□ -0.64
RTN3-206ENST00000377819 ZNF786Q8N393 782 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 TMEM169Q96HH4 297 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 IL1RL2Q9HB29 575 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 GRID1Q9ULK0 1009 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CLIC4Q9Y696 253 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 TRPC5OSA6NMA1 111 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ERVV-2B6SEH9 535 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 SMIM22K7EJ46 135 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 KCNN4O15554 427 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 FTLP02792 175 aaPredicted RBP11.04□□□□□ -0.64
RTN3-206ENST00000377819 NR3C1P04150 777 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 POLBP06746 335 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 UQCRBP14927 111 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ZNF23P17027 643 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 HOXC9P31274 260 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 BTN3A2P78410 334 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 CDH18Q13634 790 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 TOMM20Q15388 145 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 MGAT5BQ3V5L5 792 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 MRNIPQ6NTE8 343 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 EXOC3L1Q86VI1 746 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 IQCF2Q8IXL9 164 aa11.04□□□□□ -0.64
RTN3-206ENST00000377819 ATG16L2Q8NAA4 619 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms