RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PRKAA1Q13131 559 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 SNRNP35Q16560 246 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 LONRF1Q17RB8 773 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 OLFML2BQ68BL8 750 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 BTBD9Q96Q07 612 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 TMEM245Q9H330 911 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 LOC102724428A0A0B4J2F2 783 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 CLIC2O15247 247 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 ASNA1O43681 348 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 SNX3O60493 162 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 PDE9AO76083 593 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 HOXC6P09630 235 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 SIK1P57059 783 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 LRRC8DQ7L1W4 858 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 HAUS6Q7Z4H7 955 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 KLHL23Q8NBE8 558 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 LENG1Q96BZ8 264 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 GORASP1Q9BQQ3 440 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 FANCEQ9HB96 536 aa9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-202ENST00000376020 MATN2O00339 956 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 GSCP56915 257 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 GCNT1Q02742 428 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PDK4Q16654 411 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 IZUMO2Q6UXV1 221 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 NLGN1Q8N2Q7 840 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 FNIP1Q8TF40 1166 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 OSBPL11Q9BXB4 747 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 NDEL1Q9GZM8 345 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CDC42EP4Q9H3Q1 356 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 NMRK1Q9NWW6 199 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 DIP2BQ9P265 1576 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 RBP1P09455 135 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 RFX4Q33E94 735 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CYP4F11Q9HBI6 524 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PLGRKTQ9HBL7 147 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ADSLP30566 484 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 DYNLT1P63172 113 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ENPEPQ07075 957 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PPIDQ08752 370 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ARL8AQ96BM9 186 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 C11orf70Q9BRQ4 267 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ADNPQ9H2P0 1102 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 COBLO75128 1261 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CAPN15O75808 1086 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CHN2P52757 468 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PPHLN1Q8NEY8 458 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 SPATA20Q8TB22 786 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ZFAND2BQ8WV99 257 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PCDHA6Q9UN73 950 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PCDHA8Q9Y5H6 950 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 RPS6KA3P51812 740 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ALDH18A1P54886 795 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 EIF6P56537 245 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 MSLNQ13421 630 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 BLMHQ13867 455 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 AGAP9Q5VTM2 703 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 GALNT15Q8N3T1 639 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 STOML2Q9UJZ1 356 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CPA3P15088 417 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 COMTP21964 271 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 RFC5P40937 340 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 NIM1KQ8IY84 436 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 RASGRP4Q8TDF6 673 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 FAM149B1Q96BN6 582 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 DHX33Q9H6R0 707 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 NGRNQ9NPE2 291 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 FAM32AQ9Y421 112 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CAPN6Q9Y6Q1 641 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 A0A087X0T9 212 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 SDR42E2A6NKP2 422 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 FAM228BP0C875 321 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 GARTP22102 1010 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 CKAP2Q8WWK9 683 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 MAGEE1Q9HCI5 957 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PNPLA3Q9NST1 481 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PCDHGB4Q9UN71 923 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 TRIM24O15164 1050 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 SERPINE1P05121 402 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 FBXO25Q8TCJ0 367 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 GANQ9H2C0 597 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PIH1D3Q9NQM4 214 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 DMTF1Q9Y222 760 aa9.17□□□□□ -0.94
SHROOM4-202ENST00000376020 PRRC2BQ5JSZ5 2229 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RIPK2O43353 540 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 LRRC14Q15048 493 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CLEC4FQ8N1N0 589 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RIN2Q8WYP3 895 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RBAKQ9NYW8 714 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CD3EAPO15446 510 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 ANGPT1Q15389 498 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms