RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
MSH5-204ENST00000375755 STBD1O95210 358 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 FDX1P10109 184 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 PSMC4P43686 418 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 NEK3P51956 506 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 PSMC5P62195 406 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ACP6Q9NPH0 428 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 DCTN4Q9UJW0 460 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 R3HDM2Q9Y2K5 976 aaKnown RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
MSH5-204ENST00000375755 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 CCDC22O60826 627 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 SGPL1O95470 568 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 EPHX2P34913 555 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 CAV1Q03135 178 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 MCL1Q07820 350 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 RFWD2Q8NHY2 731 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ZNF75CPQ92670 426 aaPredicted RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 DTNBP1Q96EV8 351 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 PTCD3Q96EY7 689 aaKnown RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 STX18Q9P2W9 335 aaKnown RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 PCDHA10Q9Y5I2 948 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 SOWAHBA6NEL2 793 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 MAP3K7O43318 606 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 CNMDO75829 334 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 LYNP07948 512 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 CA4P22748 312 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ACTR2P61160 394 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 KAT5Q92993 513 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ZNF184Q99676 751 aaPredicted RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 FAM118BQ9BPY3 351 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 DCLK3Q9C098 648 aa13.6□□□□□ -0.23
MSH5-204ENST00000375755 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
MSH5-204ENST00000375755 MCM3APO60318 1980 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 CFAP69A5D8W1 941 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 POC1B-GALNT4F8VUJ3 575 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 GAS8O95995 478 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 GJA5P36382 358 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 MAGEA4P43358 317 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 KRT76Q01546 638 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 OVGP1Q12889 678 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 RASIP1Q5U651 963 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 SYDE1Q6ZW31 735 aaPredicted RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 TRIM73Q86UV7 250 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 GPRASP2Q96D09 838 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 PRR11Q96HE9 360 aaPredicted RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 SYNCQ9H7C4 482 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 ZNF408Q9H9D4 720 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 RPS6KL1Q9Y6S9 549 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 CREB3O43889 395 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 PLS3P13797 630 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 ZRSR2Q15696 482 aaKnown RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 MAPK6Q16659 721 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 RINLQ6ZS11 566 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 OPTNQ96CV9 577 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 SPATC1LQ9H0A9 340 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
MSH5-204ENST00000375755 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.59□□□□□ -0.23
MSH5-204ENST00000375755 A0A0G2JLL6 359 aaPredicted RBP13.58□□□□□ -0.23
MSH5-204ENST00000375755 SPATA31C2B4DYI2 1134 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 GYG2O15488 501 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 CYP1A2P05177 515 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 KRT15P19012 456 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.23
MSH5-204ENST00000375755 JAK3P52333 1124 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 PRRT2Q7Z6L0 340 aaPredicted RBP13.58□□□□□ -0.23
MSH5-204ENST00000375755 KCTD17Q8N5Z5 321 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 PLEKHO2Q8TD55 490 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 SPIRE2Q8WWL2 714 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 NCSTNQ92542 709 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 ZNF653Q96CK0 615 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 SMC6Q96SB8 1091 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 SPATA16Q9BXB7 569 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 ZWILCHQ9H900 591 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 DMAC2Q9NW81 257 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 KCND2Q9NZV8 630 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 SEPT9Q9UHD8 586 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms