RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 STAG3L1P0CL83 205 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 MAN1A1P33908 653 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 ADCYAP1R1P41586 468 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 RAP1GAPP47736 663 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 CCNA1P78396 465 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 MKRN3Q13064 507 aaKnown RBP14.76□□□□□ -0.05
MSH5-202ENST00000375740 CALCOCO2Q13137 446 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 EXD1Q8NHP7 514 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 CHMP6Q96FZ7 201 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 SIX4Q9UIU6 781 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 PLXNA1Q9UIW2 1896 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 A8MUI8 341 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 AP1G2O75843 785 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ZNF286BP0CG31 522 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 TCF4P15884 667 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 CDH8P55286 799 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ZNF252P-AS1Q0IIN9 211 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 TRIP13Q15645 432 aaPredicted RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 AMHR2Q16671 573 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 DENND1BQ6P3S1 775 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 DNAJC24Q6P3W2 148 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ERICH1Q86X53 443 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ATL2Q8NHH9 583 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 CPB2Q96IY4 423 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 MCEEQ96PE7 176 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 XPO6Q96QU8 1125 aaKnown RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 FAM118BQ9BPY3 351 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ZNF518BQ9C0D4 1074 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 KLHL11Q9NVR0 708 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 WHRNQ9P202 907 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ASIC3Q9UHC3 531 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 PCDHGC3Q9UN70 934 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 SLC12A4Q9UP95 1085 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 AKT3Q9Y243 479 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 TP73O15350 636 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 MAGEB2O15479 319 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 CAND2O75155 1236 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 VTNP04004 478 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 RARGP13631 454 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 FGFR4P22455 802 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 EIF4BP23588 611 aaKnown RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 OGDHQ02218 1023 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 POU5F1BQ06416 359 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 SLMAPQ14BN4 828 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 FAM187BQ17R55 369 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 WDR72Q3MJ13 1102 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 ERMARDQ5T6L9 678 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 CYP4A22Q5TCH4 519 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 DCUN1D2Q6PH85 259 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 FAM43BQ6ZT52 329 aaPredicted RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 LINC01465Q8N7H1 131 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 C1orf127Q8N9H9 656 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 CCDC197Q8NCU1 140 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 UHMK1Q8TAS1 419 aaKnown RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 ZNF317Q96PQ6 595 aaPredicted RBP14.75□□□□□ -0.05
MSH5-202ENST00000375740 VTA1Q9NP79 307 aa14.75□□□□□ -0.05
MSH5-202ENST00000375740 F8VP50 259 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 PI4K2BG5E9Z4 385 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 CD19P15391 556 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 ITIH2P19823 946 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 IVDP26440 423 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 PTK6Q13882 451 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 JADE1Q6IE81 842 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 SYDE1Q6ZW31 735 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 CCDC25Q86WR0 208 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 PPTC7Q8NI37 304 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 GRK7Q8WTQ7 553 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 GTF3C2Q8WUA4 911 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 TLDC2A0PJX2 215 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 BTBD19C9JJ37 291 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 MCF2P10911 925 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 YWHAEP62258 255 aaKnown RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 CCNG2Q16589 344 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 PPP1R15BQ5SWA1 713 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 CAPRIN2Q6IMN6 1127 aaKnown RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 MS4A4AQ96JQ5 239 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 ELAC2Q9BQ52 826 aaKnown RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 C16orf70Q9BSU1 422 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 SDCBP2Q9H190 292 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 PDZD7Q9H5P4 517 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 SPATS2LQ9NUQ6 558 aaKnown RBP14.74□□□□□ -0.05
MSH5-202ENST00000375740 ABCF3Q9NUQ8 709 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
MSH5-202ENST00000375740 KLHL33A6NCF5 533 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 SMNDC1O75940 238 aaKnown RBP eCLIP14.73□□□□□ -0.051e-8■■□□□ 12
MSH5-202ENST00000375740 SNAI1O95863 264 aaPredicted RBP14.73□□□□□ -0.05
MSH5-202ENST00000375740 ITGB3P05106 788 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 KRT10P13645 584 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms