RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NUDT17P0C025 328 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 INSRRP14616 1297 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 TAS2R40P59535 323 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 MAGOHP61326 146 aaKnown RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 RPL7AP62424 266 aaKnown RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 MBTD1Q05BQ5 628 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 EEF1DP3Q658K8 133 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SYDE1Q6ZW31 735 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 KATNAL2Q8IYT4 538 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 CEP120Q8N960 986 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 AFG1LQ8WV93 481 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF518BQ9C0D4 1074 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ZMYND8Q9ULU4 1186 aaPredicted RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ALPK3Q96L96 1907 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 O00370 1275 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SHBGP04278 402 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 CXCL8P10145 99 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 TMOD1P28289 359 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ARHGAP1Q07960 439 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SLC39A5Q6ZMH5 540 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ERICH1Q86X53 443 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 EXD1Q8NHP7 514 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 CDT1Q9H211 546 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 ATP11BQ9Y2G3 1177 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
HMGCL-202ENST00000374487 TMEM191CA6NGB0 347 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 CSDE1O75534 798 aaKnown RBP12.78□□□□□ -0.36
HMGCL-202ENST00000374487 C22orf31O95567 290 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 GH1P01241 217 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 RARGP13631 454 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 CD19P15391 556 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 ITIH2P19823 946 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 FGFR4P22455 802 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 EIF4BP23588 611 aaKnown RBP12.78□□□□□ -0.36
HMGCL-202ENST00000374487 ADCY8P40145 1251 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 ASPAP45381 313 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 CDR1P51861 262 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 TRIP13Q15645 432 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-202ENST00000374487 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 TRIM60Q495X7 471 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
HMGCL-202ENST00000374487 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 DCLK3Q9C098 648 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 EPN3Q9H201 632 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 WHRNQ9P202 907 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
HMGCL-202ENST00000374487 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
HMGCL-202ENST00000374487 MAGEB2O15479 319 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 CAND2O75155 1236 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 LGALS2P05162 132 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 MYL3P08590 195 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 IQCF3P0C7M6 154 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 PPARDQ03181 441 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF365Q70YC5 407 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 CROCCP2Q86T23 111 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 SRLQ86TD4 932 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 SNF8Q96H20 258 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 EPB41L4BQ9H329 900 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 IFT122Q9HBG6 1241 aa12.77□□□□□ -0.36
HMGCL-202ENST00000374487 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.36
HMGCL-202ENST00000374487 A0A087WZ62 844 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 MED7O43513 233 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 STAG3L1P0CL83 205 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 ATF2P15336 505 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 TAP1Q03518 808 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 KLF1Q13351 362 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-202ENST00000374487 BYSLQ13895 437 aaKnown RBP12.77□□□□□ -0.37
HMGCL-202ENST00000374487 CCNG2Q16589 344 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 PTGISQ16647 500 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 TMEM192Q8IY95 271 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 RCOR2Q8IZ40 523 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 UHMK1Q8TAS1 419 aaKnown RBP12.77□□□□□ -0.37
HMGCL-202ENST00000374487 TFAP2BQ92481 460 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 RBM41Q96IZ5 413 aaKnown RBP12.77□□□□□ -0.37
HMGCL-202ENST00000374487 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
HMGCL-202ENST00000374487 TSPYL1Q9H0U9 437 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 PCDHGC3Q9UN70 934 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms