RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 OOSP2Q86WS3 158 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KAZALD1Q96I82 304 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 MS4A14Q96JA4 679 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 TAF1DQ9H5J8 278 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 IL1RL2Q9HB29 575 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 AGPAT3Q9NRZ7 376 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 TRIM33Q9UPN9 1127 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 AP3B1O00203 1094 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 FGFR4P22455 802 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 TRIM32Q13049 653 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PGM5Q15124 567 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 MAPRE1Q15691 268 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 DNERQ8NFT8 737 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PCDHB2Q9Y5E7 798 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 TCF3P15923 654 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 CUL2Q13617 745 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 LRRC14Q15048 493 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PHKG1Q16816 387 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SMTNL2Q2TAL5 461 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 XPO7Q9UIA9 1087 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 CYB561D2O14569 222 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 TADA3O75528 432 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SHMT1P34896 483 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 AVPR1AP37288 418 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 MAGOHP61326 146 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 GRIN1Q05586 938 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 C16orf87Q6PH81 154 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SLC44A2Q8IWA5 706 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ATP6V0D2Q8N8Y2 350 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ARHGEF26Q96DR7 871 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 CDCA5Q96FF9 252 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 MTG1Q9BT17 334 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 RERGLQ9H628 205 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 NCF1BA6NI72 391 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 NCF1CA8MVU1 366 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 NCF1P14598 390 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 RAP1GAPP47736 663 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 KHDRBS2Q5VWX1 349 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PLEKHM3Q6ZWE6 761 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SYTL5Q8TDW5 730 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 NRBF2Q96F24 287 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 CHP1Q99653 195 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 EML4Q9HC35 981 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ARHGAP26Q9UNA1 814 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ZNF197O14709 1029 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PQBP1O60828 265 aaKnown RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 PHF2O75151 1096 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 HIST1H2AGP0C0S8 130 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 HIST1H2ADP20671 130 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 GGCXP38435 758 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ZNF677Q86XU0 584 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SHCBP1Q8NEM2 672 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 HIST1H2AHQ96KK5 128 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 HIST1H2AJQ99878 128 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 H2AFJQ9BTM1 129 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 SETD4Q9NVD3 440 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 AMACRQ9UHK6 382 aa10.22□□□□□ -0.77
COL4A6-202ENST00000372216 CXCL11O14625 94 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 ZNF185O15231 689 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 AP1G2O75843 785 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 CYP2C8P10632 490 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 MBL2P11226 248 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-202ENST00000372216 DDR1Q08345 913 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 MOXD1Q6UVY6 613 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 ADGRF2Q8IZF7 708 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 VWA5AO00534 786 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 OGTO15294 1046 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 B3GAT3O94766 335 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 APRTP07741 180 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 ZBTB17Q13105 803 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 CDH18Q13634 790 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.21□□□□□ -0.77
COL4A6-202ENST00000372216 CD302Q8IX05 232 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 KIAA1683Q9H0B3 1180 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 OSGEPL1Q9H4B0 414 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 FAM96AQ9H5X1 160 aa10.21□□□□□ -0.77
COL4A6-202ENST00000372216 URODP06132 367 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ADORA2AP29274 412 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ALDH18A1P54886 795 aaKnown RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 CTXN3Q4LDR2 81 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 KLHDC7AQ5VTJ3 777 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 CINPQ9BW66 212 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ADNPQ9H2P0 1102 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ZFYVE1Q9HBF4 777 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 ARHGEF38Q9NXL2 777 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 USE1Q9NZ43 259 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 NPTX2P47972 431 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 NAB2Q15742 525 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 GRIK4Q16099 956 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 METTL7BQ6UX53 244 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 SLC30A10Q6XR72 485 aa10.21□□□□□ -0.78
COL4A6-202ENST00000372216 TRAPPC11Q7Z392 1133 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms