RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 P2RX5Q93086 422 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 KLRC2P26717 231 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SERPINH1P50454 418 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 UBE3CQ15386 1083 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 RPTNQ6XPR3 784 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 DDI1Q8WTU0 396 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 STAMBPL1Q96FJ0 436 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 XPO6Q96QU8 1125 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 RNF146Q9NTX7 359 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SHOC2Q9UQ13 582 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 NCKAP1Q9Y2A7 1128 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 HEG1Q9ULI3 1381 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 IDH3BO43837 385 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 AMD1P17707 334 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CDH2P19022 906 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 BCAR1P56945 870 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 HUNKP57058 714 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 ZNF544Q6NX49 715 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SLC13A5Q86YT5 568 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 P3H2Q8IVL5 708 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CDKL3Q8IVW4 592 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 KIAA1586Q9HCI6 787 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CCDC189A1A4V9 331 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 XPO1O14980 1071 aaKnown RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 CES1P23141 567 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SCNN1AP37088 669 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 RGS4P49798 205 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 MKRN4PQ13434 485 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 SEPT2Q15019 361 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CARTPTQ16568 116 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CYB5R4Q7L1T6 521 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 HPS6Q86YV9 775 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 RNF149Q8NC42 400 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 C19orf60Q96EN9 201 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CCDC51Q96ER9 411 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 CCDC17Q96LX7 622 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 FOXP3Q9BZS1 431 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 SNX24Q9Y343 169 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
CHD3-202ENST00000358181 SNX9Q9Y5X1 595 aa10.16□□□□□ -0.78
CHD3-202ENST00000358181 POTEMA6NI47 508 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 OR7A10O76100 309 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 CNPP09543 421 aaKnown RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 DGKDQ16760 1214 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 ATP6V1C2Q8NEY4 427 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PIGKQ92643 395 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 RPRD1AQ96P16 312 aaPredicted RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 PAIP1Q9H074 479 aaKnown RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 SCN3BQ9NY72 215 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PDZK1P1A8MUH7 402 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 AREL1O15033 823 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 CMA1P23946 247 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 KIAA1324Q6UXG2 1013 aaKnown RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 LRRC8AQ8IWT6 810 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 BLOC1S5Q8TDH9 187 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 ZNF560Q96MR9 790 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 C3orf70A6NLC5 250 aaPredicted RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 MEI4A8MW99 385 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 SH2B2O14492 632 aaPredicted RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 PQBP1O60828 265 aaKnown RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PPP1R2P3Q6NXS1 205 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 RASSF6Q6ZTQ3 369 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 MARCOQ9UEW3 520 aaPredicted RBP10.15□□□□□ -0.78
CHD3-202ENST00000358181 HACL1Q9UJ83 578 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 USP17L10C9JJH3 530 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 IER5Q5VY09 327 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 CACTIN-AS1Q8N1I8 211 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 TMEM35BQ8NCS4 154 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 TRPC4APQ8TEL6 797 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 CAPSLQ8WWF8 208 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 MAP4K1Q92918 833 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 ROGDIQ9GZN7 287 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PTPRHQ9HD43 1115 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PLA2G4CQ9UP65 541 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 PPP2R3BQ9Y5P8 575 aa10.15□□□□□ -0.78
CHD3-202ENST00000358181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.15□□□□□ -0.79
CHD3-202ENST00000358181 EVPLLA8MZ36 301 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 SERPING1P05155 500 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 SREBF2Q12772 1141 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 ZNF177Q13360 481 aaPredicted RBP10.15□□□□□ -0.79
CHD3-202ENST00000358181 ACOX1Q15067 660 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 RNF180Q86T96 592 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 EXOC2Q96KP1 924 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 INTS10Q9NVR2 710 aaKnown RBP10.15□□□□□ -0.79
CHD3-202ENST00000358181 ERAP1Q9NZ08 941 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 AGAP1Q9UPQ3 857 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 BBOX1O75936 387 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 GRK4P32298 578 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 LSP1P33241 339 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 SOX6P35712 828 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 FCGRTP55899 365 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 BIKQ13323 160 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 GALNT17Q6IS24 598 aa10.15□□□□□ -0.79
CHD3-202ENST00000358181 HIBCHQ6NVY1 386 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms