RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RFWD3Q6PCD5 774 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 VPS52Q8N1B4 723 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP11CQ8NB49 1132 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 MXRA8Q9BRK3 442 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 TBX20Q9UMR3 447 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 PCDHB4Q9Y5E5 795 aa8.66□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP2A1O14983 1001 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 ASLP04424 464 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 NAT1P18440 290 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 NPTX2P47972 431 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 CPA2P48052 419 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PSMD7P51665 324 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 RPL7AP62424 266 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PHEXP78562 749 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 GAD2Q05329 585 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCNG2Q16589 344 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZNF568Q3ZCX4 644 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 WASHC2DQ5SRD0 308 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 LIN9Q5TKA1 542 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 SYDE1Q6ZW31 735 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 OTOAQ7RTW8 1153 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 BBOF1Q8ND07 529 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 SCG3Q8WXD2 468 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAML1Q92585 1016 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 GATA6Q92908 595 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PRMT6Q96LA8 375 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 MPHOSPH6Q99547 160 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 GLIS2Q9BZE0 524 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 LRMDAQ9H2I8 198 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 EXOC7Q9UPT5 735 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 STARD13Q9Y3M8 1113 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP5HO75947 161 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PROSCO94903 275 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 UBTFL6P0CB48 400 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 FGFR1P11362 822 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 DSG3P32926 999 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 OXCT1P55809 520 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 OCRLQ01968 901 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PLOD1Q02809 727 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 NFX1Q12986 1120 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 KHDC1Q4VXA5 237 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 LIN52Q52LA3 116 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 MDH1BQ5I0G3 518 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 SNX30Q5VWJ9 437 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 DCUN1D2Q6PH85 259 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 PPFIBP2Q8ND30 876 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 CHURC1Q8WUH1 139 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLCO2A1Q92959 643 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 CATSPER2Q96P56 530 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 STRA6Q9BX79 667 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAK16Q9BXY0 300 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATAD5Q96QE3 1844 aa8.65□□□□□ -1.02
CDC42SE1-201ENST00000357235 GYG2O15488 501 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 EDF1O60869 148 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZBED4O75132 1171 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZCCHC18P0CG32 403 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 TROVE2P10155 538 aaKnown RBP eCLIP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MLH1P40692 756 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC1A1P43005 524 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CENPCQ03188 943 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SPP2Q13103 211 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 TFDP1Q14186 410 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 RCN1Q15293 331 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 KLC3Q6P597 504 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MFSD7Q6UXD7 560 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 DSTYKQ6XUX3 929 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 USP37Q86T82 979 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAP7D3Q8IWC1 876 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF75CPQ92670 426 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 TTC17Q96AE7 1141 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC7A6OSQ96CW6 309 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CEP170P1Q96L14 293 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 DDX50Q9BQ39 737 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 FBXO6Q9NRD1 293 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 LGALS13Q9UHV8 139 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 AGTPBP1Q9UPW5 1226 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 PCNTO95613 3336 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SPATA31D3P0C874 917 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MARK3P27448 753 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 GNA15P30679 374 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 GPC3P51654 580 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 GTF2BQ00403 316 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SULT2A1Q06520 285 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ACVR2BQ13705 512 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MYBPC2Q14324 1141 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms