RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 NPHP3-ACAD11A0A0J9YXS1 232 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 KBTBD13C9JR72 458 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 GRAP2O75791 330 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 SASH1O94885 1247 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 CTSHP09668 335 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 AP3M2P53677 418 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 RBM12Q9NTZ6 932 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 FBXO40Q9UH90 709 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 APPL1Q9UKG1 709 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 PCDHB7Q9Y5E2 793 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 USP17L10C9JJH3 530 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 ECE2O60344 883 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM13O60858 407 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 CYP2D6P10635 497 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 FLT3P36888 993 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 NDUFA5Q16718 116 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 ADGRF4Q8IZF3 695 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 MCEEQ96PE7 176 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.57e-15■■□□□ 12.4
SPTBN1-202ENST00000356805 PSMD3O43242 534 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 CCDC149Q6ZUS6 474 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 FAR2Q96K12 515 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 CNDP1Q96KN2 507 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 RAB21Q9UL25 225 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 KIAA0556O60303 1618 aa11.96□□□□□ -0.5
SPTBN1-202ENST00000356805 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ATP12AP54707 1039 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM32Q13049 653 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SPDYCQ5MJ68 293 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 EIF1ADQ8N9N8 165 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM20AQ96MK3 541 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 COPG2Q9UBF2 871 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SCP2P22307 547 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SFNP31947 248 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 HSD17B3P37058 310 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 RNF146Q9NTX7 359 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 EVPLLA8MZ36 301 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM47E-STBD1D6RA91 191 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ASNA1O43681 348 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 TPP2P29144 1249 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 AVPR1AP37288 418 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 USP11P51784 963 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 KRT76Q01546 638 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 MGAT5BQ3V5L5 792 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 P3H2Q8IVL5 708 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ST13P5Q8NFI4 369 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CCSER1Q9C0I3 900 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 DBR1Q9UK59 544 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 PCDHGA4Q9Y5G9 962 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 EEF2KO00418 725 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SNRPAP09012 282 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 RGS4P49798 205 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF200P98182 395 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SCUBE1Q8IWY4 988 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 KIF2BQ8N4N8 673 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ECSITQ9BQ95 431 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 KIF28PB7ZC32 967 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CYP26A1O43174 497 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CBFA2T3O75081 653 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 PRIM2P49643 509 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 LONRF1Q17RB8 773 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ZFP1Q6P2D0 407 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 UXS1Q8NBZ7 420 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SNRNP27Q8WVK2 155 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 SPRTNQ9H040 489 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FANCEQ9HB96 536 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM153AQ9UHL3 310 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 GSTM1P09488 218 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM49P0CI25 452 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM49CP0CI26 452 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CNGA2Q16280 664 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 JAMLQ86YT9 394 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 AHI1Q8N157 1196 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 IPMKQ8NFU5 416 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 F8W810 466 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms