RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ARF3P61204 181 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 LRRC14Q15048 493 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SLC9A7Q96T83 725 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 NTSR2O95665 410 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 KRT16P08779 473 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 POU1F1P28069 291 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 GRM4Q14833 912 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SIK3Q9Y2K2 1263 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 MFN2O95140 757 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 RARBP10826 455 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 BARHL2Q9NY43 387 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 HDAC6Q9UBN7 1215 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SNX6Q9UNH7 406 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 BCAR1P56945 870 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MGAT5BQ3V5L5 792 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 NACC2Q96BF6 587 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 SH3GLB2Q9NR46 395 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CCDC22O60826 627 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 DGKIO75912 1065 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PGM1P36871 562 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ALDH1A3P47895 512 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 RGS4P49798 205 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 SREBF2Q12772 1141 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 TRIM43BA6NCK2 446 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 HSMCR30P0CW71 290 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PUDPQ08623 228 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ARHGAP15Q53QZ3 475 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 R3HCC1LQ7Z5L2 792 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PPRC1Q5VV67 1664 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 LAMC1P11047 1609 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PCNAP12004 261 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PGS1Q32NB8 556 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 NOL9Q5SY16 702 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 EPHX4Q8IUS5 362 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 FAM129BQ96TA1 746 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CDH6P55285 790 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 TOB2Q14106 344 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CCSAPQ6IQ19 270 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PRR23CQ6ZRP0 262 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 GLMNQ92990 594 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 EIF2AK1Q9BQI3 630 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PCDHB7Q9Y5E2 793 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CETPP11597 493 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CHRM3P20309 590 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 KLRK1P26718 216 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MAGOHP61326 146 aaKnown RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 SLC30A9Q6PML9 568 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 LAYNQ6UX15 382 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 CDKL3Q8IVW4 592 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-201ENST00000347662 GPRC5AQ8NFJ5 357 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 PCDHA10Q9Y5I2 948 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 USP31Q70CQ4 1352 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
TRAF3-201ENST00000347662 DIP2AQ14689 1571 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 PALMO75781 387 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 SRP72O76094 671 aaKnown RBP12.27□□□□□ -0.44
TRAF3-201ENST00000347662 WNK4Q96J92 1243 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 KLHL1Q9NR64 748 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 C19orf81C9J6K1 198 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 JAK1P23458 1154 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 PLA2G4AP47712 749 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 RABGAP1LQ5R372 815 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.44
TRAF3-201ENST00000347662 KLHL17Q6TDP4 642 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 FAM151AQ8WW52 585 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms