RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 GIPC2Q8TF65 315 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 DDX1Q92499 740 aaKnown RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 FAM84AQ96KN4 292 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 DNAJC25Q9H1X3 360 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TASP1Q9H6P5 420 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 CDV3Q9UKY7 258 aaKnown RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 ZNF292O60281 2723 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TSC2P49815 1807 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TNNC2P02585 160 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 GABRR2P28476 465 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 AFMP43652 599 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 RBP5P82980 135 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 E2F4Q16254 413 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 GPR158Q5T848 1215 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
SGCA-202ENST00000344627 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 ARID3BQ8IVW6 561 aaPredicted RBP13.35□□□□□ -0.27
SGCA-202ENST00000344627 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 DCLK2Q8N568 766 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 RDH13Q8NBN7 331 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 BLZF1Q9H2G9 400 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 KIF9Q9HAQ2 790 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 ITGA11Q9UKX5 1188 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
SGCA-202ENST00000344627 SPTBN4Q9H254 2564 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 F5P12259 2224 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 KIAA0391O15091 583 aaKnown RBP13.34□□□□□ -0.27
SGCA-202ENST00000344627 ATG13O75143 517 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
SGCA-202ENST00000344627 CCNE1P24864 410 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 CASP1P29466 404 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 CYP2J2P51589 502 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 MYL7Q01449 175 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 DNM1Q05193 864 aaKnown RBP13.34□□□□□ -0.27
SGCA-202ENST00000344627 PKP1Q13835 747 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 NFE2Q16621 373 aaPredicted RBP13.34□□□□□ -0.27
SGCA-202ENST00000344627 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 NETO1Q8TDF5 533 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 C7orf25Q9BPX7 421 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 DDX43Q9NXZ2 648 aaKnown RBP13.34□□□□□ -0.27
SGCA-202ENST00000344627 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 TICRRQ7Z2Z1 1910 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
SGCA-202ENST00000344627 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 CLIC2O15247 247 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.28
SGCA-202ENST00000344627 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
SGCA-202ENST00000344627 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 SURF1Q15526 300 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 UNC13DQ70J99 1090 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 GAREM2Q75VX8 874 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
SGCA-202ENST00000344627 LOXL4Q96JB6 756 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 FNBP1Q96RU3 617 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 KIAA1586Q9HCI6 787 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 UXTQ9UBK9 157 aaPredicted RBP13.33□□□□□ -0.28
SGCA-202ENST00000344627 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 L1RE1Q9UN81 338 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
SGCA-202ENST00000344627 PATJQ8NI35 1801 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
SGCA-202ENST00000344627 OTOGLQ3ZCN5 2332 aa13.33□□□□□ -0.28
SGCA-202ENST00000344627 AKAP3O75969 853 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 CLSTN1O94985 981 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 CSH1P0DML2 217 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 CSH2P0DML3 217 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 DLATP10515 647 aaKnown RBP13.32□□□□□ -0.28
SGCA-202ENST00000344627 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
SGCA-202ENST00000344627 TNNI1P19237 187 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms