RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 C2orf15Q8WU43 125 aaKnown RBP15.98■□□□□ 0.15
KATNA1-201ENST00000335643 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 NXPE3Q969Y0 559 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 SYT15Q9BQS2 421 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 MKNK1Q9BUB5 465 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 DPEP3Q9H4B8 488 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 IL21Q9HBE4 155 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 RMND1Q9NWS8 449 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 GDE1Q9NZC3 331 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 NXF1Q9UBU9 619 aaKnown RBP15.98■□□□□ 0.15
KATNA1-201ENST00000335643 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 FRMD4BQ9Y2L6 1034 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 PCDHB5Q9Y5E4 795 aa15.98■□□□□ 0.15
KATNA1-201ENST00000335643 GREB1Q4ZG55 1949 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 MICAL2O94851 1124 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 SRFP11831 508 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 NPR3P17342 541 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 RAP1GAPP47736 663 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 TUFMP49411 452 aaKnown RBP15.97■□□□□ 0.15
KATNA1-201ENST00000335643 VAMP7P51809 220 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 CDH8P55286 799 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 GPC5P78333 572 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 PPP3CAQ08209 521 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 TRPC3Q13507 836 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 NCOA4Q13772 614 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 DDR2Q16832 855 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 COBLL1Q53SF7 1204 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 SPOPLQ6IQ16 392 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 FAM186BQ8IYM0 893 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 ADSSL1Q8N142 457 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 SPATA18Q8TC71 538 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 CCDC34Q96HJ3 373 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 SDCBP2Q9H190 292 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.97■□□□□ 0.153e-7■■■■■ 60.9
KATNA1-201ENST00000335643 COL4A2P08572 1712 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 MUC6Q6W4X9 2439 aa15.97■□□□□ 0.15
KATNA1-201ENST00000335643 ZNF197O14709 1029 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 MAPK13O15264 365 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 PHACTR2O75167 634 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 TACC1O75410 805 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 HMGA1P17096 107 aaKnown RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 TNNC1P63316 161 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 SMARCB1Q12824 385 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 EDRF1Q3B7T1 1238 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 CWF19L1Q69YN2 538 aaKnown RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 ANKRD40Q6AI12 368 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 SCARA5Q6ZMJ2 495 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 MTSS1LQ765P7 747 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 ELOA2Q8IYF1 753 aaPredicted RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 SIX5Q8N196 739 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 NUP210Q8TEM1 1887 aaPredicted RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 MYLPFQ96A32 169 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 SYAP1Q96A49 352 aaPredicted RBP15.96■□□□□ 0.15
KATNA1-201ENST00000335643 ASB16Q96NS5 453 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 VRTNQ9H8Y1 702 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 CA14Q9ULX7 337 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 ASB3Q9Y575 518 aa15.96■□□□□ 0.15
KATNA1-201ENST00000335643 KINO60870 393 aaKnown RBP15.96■□□□□ 0.14
KATNA1-201ENST00000335643 SMC2O95347 1197 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 GABRR2P28476 465 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 PCSK1P29120 753 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 ATICP31939 592 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 PSMC2P35998 433 aaKnown RBP15.96■□□□□ 0.14
KATNA1-201ENST00000335643 GCLMP48507 274 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 AP3M2P53677 418 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 CYP4F8P98187 520 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 NFE2Q16621 373 aaPredicted RBP15.96■□□□□ 0.14
KATNA1-201ENST00000335643 ZNF699Q32M78 642 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 CFAP221Q4G0U5 840 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 TMEM150AQ86TG1 271 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 LEMD2Q8NC56 503 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 OR6B3Q8NGW1 331 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 FAM200AQ8TCP9 573 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 RSPRY1Q96DX4 576 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 MMRN2Q9H8L6 949 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 TMEM30AQ9NV96 361 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 CDH9Q9ULB4 789 aa15.96■□□□□ 0.14
KATNA1-201ENST00000335643 IKBKBO14920 756 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 ECI2O75521 394 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 HLA-DRAP01903 254 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 GNL1P36915 607 aaPredicted RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 VIPR2P41587 438 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 CACNA2D1P54289 1103 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 MCCD1P59942 119 aaPredicted RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 INTS8Q75QN2 995 aaKnown RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 ZC3H3Q8IXZ2 948 aaKnown RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 TMEM105Q8N8V8 129 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 ZSCAN18Q8TBC5 510 aaPredicted RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 TAS1R2Q8TE23 839 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 PCED1BQ96HM7 432 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 APOBEC3GQ9HC16 384 aaKnown RBP15.95■□□□□ 0.14
KATNA1-201ENST00000335643 SLC2A4RGQ9NR83 387 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 FBXL21Q9UKT6 434 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 HCN4Q9Y3Q4 1203 aa15.95■□□□□ 0.14
KATNA1-201ENST00000335643 BIN1O00499 593 aa15.94■□□□□ 0.14
KATNA1-201ENST00000335643 PI15O43692 258 aa15.94■□□□□ 0.14
KATNA1-201ENST00000335643 ASS1P00966 412 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms