RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 GPN3Q9UHW5 284 aaPredicted RBP12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 ADH1AP07327 375 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 DACH2Q96NX9 599 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
CACNA1F-201ENST00000323022 FGGP02679 453 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 PKP1Q13835 747 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 DDX39BQ13838 428 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 E2F4Q16254 413 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 SLC35F6Q8N357 371 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 DPF2Q92785 391 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CPS1P31327 1500 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 COPEO14579 308 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 RGS4P49798 205 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 KRT72Q14CN4 511 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 KHDRBS2Q5VWX1 349 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 HLA-DQA1Q5Y7H0 255 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 XRRA1Q6P2D8 792 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 MTBPQ96DY7 904 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 IGSF9BQ9UPX0 1349 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CYP7B1O75881 506 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 RPSAP08865 295 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 LBX1P52954 281 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 GPS1Q13098 491 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CRLF3Q8IUI8 442 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 NEUROD4Q9HD90 331 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 SPATS2LQ9NUQ6 558 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 DISP2A7MBM2 1401 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 BRD2P25440 801 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CDC16Q13042 620 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 IFT88Q13099 833 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ZNF211Q13398 564 aaPredicted RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ZSCAN18Q8TBC5 510 aaPredicted RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 SYCE1LA8MT33 242 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 KRT37O76014 449 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ESRRAP11474 423 aaPredicted RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CCT5P48643 541 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 CYP4X1Q8N118 509 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 TMEM161AQ9NX61 479 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 INTUQ9ULD6 942 aa12.86□□□□□ -0.35
CACNA1F-201ENST00000323022 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 B4GALNT2Q8NHY0 566 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 NLNQ9BYT8 704 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 ASPSCR1Q9BZE9 553 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 LNPEPQ9UIQ6 1025 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 TOMM70O94826 608 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 CNTN2Q02246 1040 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 MMS22LQ6ZRQ5 1243 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 KLHL29Q96CT2 875 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 MAGED4Q96JG8 741 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 FAR2Q96K12 515 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 SLC13A1Q9BZW2 595 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 METTL5Q9NRN9 209 aaKnown RBP12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 TRAV19A0A0A6YYK7 116 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 EXTL3O43909 919 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 PMPCBO75439 489 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
CACNA1F-201ENST00000323022 IQSEC1Q6DN90 963 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms