RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 TRAF3Q13114 568 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 RUNDC3AQ59EK9 446 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CCDC162PA2VCL2 907 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 STIP1P31948 543 aaKnown RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 FDFT1P37268 417 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 THUMPD3Q9BV44 507 aaKnown RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 ACAD9Q9H845 621 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CCNA2P20248 432 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 NECTIN1Q15223 517 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 SNX13Q9Y5W8 968 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CCDC182A6NF36 153 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 PHGDHO43175 533 aaKnown RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 GLRA3O75311 464 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CHI3L2Q15782 390 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 RAD51BO15315 384 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 DYNC1LI2O43237 492 aaPredicted RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 RIPPLY1Q0D2K3 151 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ZNF211Q13398 564 aaPredicted RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 LRRC74BQ6ZQY2 392 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 NCAPD2Q15021 1401 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 USP11P51784 963 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ATP1A4Q13733 1029 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 NAPEPLDQ6IQ20 393 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 JAMLQ86YT9 394 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 SLC35G2Q8TBE7 412 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 NCKIPSDQ9NZQ3 722 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ZBTB5O15062 677 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 PPP2R1BP30154 601 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 CCDC153Q494R4 210 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 STX12Q86Y82 276 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 TRPC4APQ8TEL6 797 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 ANKRD49Q8WVL7 239 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
PDE12-201ENST00000311180 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 SPACA6W5XKT8 324 aa12.67□□□□□ -0.38
PDE12-201ENST00000311180 SUPT3HB4E1H0 165 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 F8W810 466 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 FLT3P36888 993 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 MTMR1Q13613 665 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 TMPRSS6Q8IU80 811 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SLC22A9Q8IVM8 553 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 CENPLQ8N0S6 344 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 WDR12Q9GZL7 423 aaKnown RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 CD274Q9NZQ7 290 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SLC34A1Q06495 639 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 XRCC4Q13426 336 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PDIA5Q14554 519 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 HIST2H2ACQ16777 129 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 HIST2H2AA3Q6FI13 130 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 URGCPQ8TCY9 931 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PAIP1Q9H074 479 aaKnown RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 SLITRK2Q9H156 845 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 CRNNQ9UBG3 495 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 ATP6V1HQ9UI12 483 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 A0A1W2PRG6 482 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 ARPINQ7Z6K5 226 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 RDM1Q8NG50 284 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 FAM81AQ8TBF8 368 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 BTN3A3O00478 584 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 MYL4P12829 197 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 TCN1P20061 433 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 BCAMP50895 628 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SLC29A2Q14542 456 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 KIAA0825Q8IV33 1275 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 UNC45BQ8IWX7 931 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 PIK3CDO00329 1044 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
PDE12-201ENST00000311180 P4HA2O15460 535 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 BMP10O95393 424 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 FBLN1P23142 703 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 IFNGR2P38484 337 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 SLC16A1P53985 500 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 MTERF2Q49AM1 385 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 OLFML1Q6UWY5 402 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
PDE12-201ENST00000311180 MROH7Q68CQ1 1323 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms