RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ART4Q93070 314 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 ATP6V1G3Q96LB4 118 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 EPB41L4BQ9H329 900 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 CENPHQ9H3R5 247 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 PLEKHA5Q9HAU0 1116 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 SIGLEC16A6NMB1 481 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 VDRP11473 427 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 RGS2P41220 211 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 MFSD7Q6UXD7 560 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 SAPCD2Q86UD0 394 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 C18orf25Q96B23 403 aaPredicted RBP25.43■■□□□ 1.66
RFWD2-201ENST00000308769 APBA2Q99767 749 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 APOL6Q9BWW8 343 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 LRRC4CQ9HCJ2 640 aa25.43■■□□□ 1.66
RFWD2-201ENST00000308769 METTL5Q9NRN9 209 aaKnown RBP25.43■■□□□ 1.66
RFWD2-201ENST00000308769 GOLGA6L10A6NI86 522 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 ATF7P17544 494 aaPredicted RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 PSMA2P25787 234 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 GPD2P43304 727 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 PMS2P54278 862 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 PDCLQ13371 301 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 TRIP13Q15645 432 aaPredicted RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 RGMBQ6NW40 437 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 APBB1IPQ7Z5R6 666 aaPredicted RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 EMC1Q8N766 993 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 UBA3Q8TBC4 463 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 RBM41Q96IZ5 413 aaKnown RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 TRIM6Q9C030 488 aaPredicted RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 MTRF1LQ9UGC7 380 aaKnown RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 ASIC3Q9UHC3 531 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 LCMT1Q9UIC8 334 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 GJD2Q9UKL4 321 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 RECQL4O94761 1208 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 MYZAPP0CAP1 466 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 CYP3A5P20815 502 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 YARSP54577 528 aaKnown RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 MYO1EQ12965 1108 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 SNX17Q15036 470 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 CNGA2Q16280 664 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 LRRC38Q5VT99 294 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 CHADLQ6NUI6 762 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 RCOR2Q8IZ40 523 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 AP5M1Q9H0R1 490 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 PRDM4Q9UKN5 801 aa25.42■■□□□ 1.66
RFWD2-201ENST00000308769 PIN4Q9Y237 131 aaKnown RBP25.42■■□□□ 1.66
RFWD2-201ENST00000308769 TP73O15350 636 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 HMGCRP04035 888 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 AKAP5P24588 427 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 ACTN2P35609 894 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 UBAP2Q5T6F2 1119 aaKnown RBP25.41■■□□□ 1.66
RFWD2-201ENST00000308769 C12orf29Q8N999 325 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 GRK7Q8WTQ7 553 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 RAPGEF5Q92565 580 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 DERAQ9Y315 318 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 SNX9Q9Y5X1 595 aa25.41■■□□□ 1.66
RFWD2-201ENST00000308769 TNPO2O14787 897 aaKnown RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 GSCP56915 257 aaPredicted RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 CALCOCO2Q13137 446 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 PTK6Q13882 451 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 ZBTB6Q15916 424 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 CCNG2Q16589 344 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 SPDYCQ5MJ68 293 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 ARFGAP1Q8N6T3 406 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 ATL2Q8NHH9 583 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 MRPL45Q9BRJ2 306 aaKnown RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 NT5C1AQ9BXI3 368 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 ZMYND15Q9H091 742 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 HMGB1P1B2RPK0 211 aaPredicted RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 SHOX2O60902 331 aaPredicted RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 GAS8O95995 478 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 CTGFP29279 349 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 ATP1A2P50993 1020 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 PABPC3Q9H361 631 aaKnown RBP25.4■■□□□ 1.66
RFWD2-201ENST00000308769 HOMER3Q9NSC5 361 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 TSPAN16Q9UKR8 245 aa25.4■■□□□ 1.66
RFWD2-201ENST00000308769 LRCH4O75427 683 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 CETN2P41208 172 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 PCBP1Q15365 356 aaKnown RBP eCLIP25.39■■□□□ 1.668e-6■■■■■ 32.8
RFWD2-201ENST00000308769 SMTNL2Q2TAL5 461 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 ALKAL1Q6UXT8 129 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 LEKR1Q6ZMV7 388 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 SPOCD1Q6ZMY3 1216 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 CNTN3Q9P232 1028 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 WDR35Q9P2L0 1181 aa25.39■■□□□ 1.66
RFWD2-201ENST00000308769 LRRD1A4D1F6 860 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 PIK3R2O00459 728 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 IGHA2P01877 340 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 SHBGP04278 402 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 NR1D1P20393 614 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 IVDP26440 423 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 GABRB2P47870 512 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 VPS41P49754 854 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 SLC25A11Q02978 314 aaKnown RBP25.39■■□□□ 1.65
RFWD2-201ENST00000308769 CRHR2Q13324 411 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 ZNF268Q14587 947 aaPredicted RBP25.39■■□□□ 1.65
RFWD2-201ENST00000308769 FSCN1Q16658 493 aaKnown RBP25.39■■□□□ 1.65
RFWD2-201ENST00000308769 ODF2Q5BJF6 829 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 TTC19Q6DKK2 380 aaPredicted RBP25.39■■□□□ 1.65
RFWD2-201ENST00000308769 SOCS4Q8WXH5 440 aa25.39■■□□□ 1.65
RFWD2-201ENST00000308769 CAPS2Q9BXY5 557 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms