RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HERVK_113P62684 666 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 KDSRQ06136 332 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 TBC1D19Q8N5T2 526 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 DNERQ8NFT8 737 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 BATF3Q9NR55 127 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 TEKT2Q9UIF3 430 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 MOSPD1Q9UJG1 213 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 ZNF263O14978 683 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 F9P00740 461 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 PTGER2P43116 358 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 GTF2A2P52657 109 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RABGAP1LQ5R372 815 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTCD1-201ENST00000292478 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
PTCD1-201ENST00000292478 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.27
PTCD1-201ENST00000292478 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.27
PTCD1-201ENST00000292478 C17orf102A2RUQ5 167 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 RASSF10A6NK89 507 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 F8VZ95 297 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 PTK2BQ14289 1009 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 EXD1Q8NHP7 514 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 APBB2Q92870 758 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 SH3KBP1Q96B97 665 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 NAT9Q9BTE0 207 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 OSBPL1AQ9BXW6 950 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 CASS4Q9NQ75 786 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 PDHA1P08559 390 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 RGS4P49798 205 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 CYP24A1Q07973 514 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 STX18Q9P2W9 335 aaKnown RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 SUPT3HO75486 399 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ERP27Q96DN0 273 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 FOPNLQ96NB1 174 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ZBBXA8MT70 800 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 GRAP2O75791 330 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 CSPG5O95196 566 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 CTCFP49711 727 aaPredicted RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 GEMP55040 296 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 GTF2H3Q13889 308 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ITIH4Q14624 930 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 MFN1Q8IWA4 741 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ATP6V0D2Q8N8Y2 350 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 FBXO28Q9NVF7 368 aa13.33□□□□□ -0.28
PTCD1-201ENST00000292478 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.28
PTCD1-201ENST00000292478 SRP72O76094 671 aaKnown RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 NFIAQ12857 509 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 TMEM119Q4V9L6 283 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 MROH2AA6NES4 1674 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 PROSCO94903 275 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CYP4A22Q5TCH4 519 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 LZICQ8WZA0 190 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CAVIN3Q969G5 261 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 NSL1Q96IY1 281 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 TRPC5OSA6NMA1 111 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CTSHP09668 335 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CDH2P19022 906 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 ERO1BQ86YB8 467 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 PNKPQ96T60 521 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 GID8Q9NWU2 228 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 UBE2Q2LH0YL09 131 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 FBXO21O94952 628 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 NCAM1P13591 858 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CNTFP26441 200 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 ZNF157P51786 506 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 TGFB2P61812 414 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 CCNG2Q16589 344 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 GFM2Q969S9 779 aaKnown RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 RIC8BQ9NVN3 520 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 AFF4Q9UHB7 1163 aaKnown RBP13.32□□□□□ -0.28
PTCD1-201ENST00000292478 MST1RQ04912 1400 aa13.32□□□□□ -0.28
PTCD1-201ENST00000292478 GLRA3O75311 464 aa13.31□□□□□ -0.28
PTCD1-201ENST00000292478 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1359.5 ms