RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SH3PXD2AQ5TCZ1 1133 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-201ENST00000282841 ANKS1BQ7Z6G8 1248 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 OSTM1Q86WC4 334 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SCLYQ96I15 445 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 RPS6KC1Q96S38 1066 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 MIS12Q9H081 205 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 HCSTQ9UBK5 93 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 B4GALT3O60512 393 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 GLI1P08151 1106 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 ZNF252P-AS1Q0IIN9 211 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SMTNL2Q2TAL5 461 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SGO2Q562F6 1265 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 LIN9Q5TKA1 542 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 DNAJC24Q6P3W2 148 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 CTU1Q7Z7A3 348 aaKnown RBP11.62□□□□□ -0.55
GGPS1-201ENST00000282841 DDX42Q86XP3 938 aaKnown RBP eCLIP11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-201ENST00000282841 SLAIN1Q8ND83 568 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-201ENST00000282841 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
GGPS1-201ENST00000282841 GNL1P36915 607 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 BRCC3P46736 316 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 GATMP50440 423 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PEX5P50542 639 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CCL23P55773 120 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 KCNT1Q5JUK3 1230 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PMF1Q6P1K2 205 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 TTC30AQ86WT1 665 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PHF13Q86YI8 300 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CLEC4CQ8WTT0 213 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 IFT81Q8WYA0 676 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CFHR5Q9BXR6 569 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 RHOBTB2Q9BYZ6 727 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 METTL5Q9NRN9 209 aaKnown RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 E5RJQ4 531 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PGRMC1O00264 195 aaKnown RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CYB561D2O14569 222 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 RAD51CO43502 376 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 THP07101 528 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PFKMP08237 780 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 GPD2P43304 727 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PTK7Q13308 1070 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 C8orf74Q6P047 294 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CD302Q8IX05 232 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PPP1R12CQ9BZL4 782 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 UVRAGQ9P2Y5 699 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 SASH3O75995 380 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 KCNE1P15382 129 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 KCNJ1P48048 391 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 TAF6P49848 677 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 BCAR1P56945 870 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 GUCY2DQ02846 1103 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PDCLQ13371 301 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 SNX1Q13596 522 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CDO1Q16878 200 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CCDC50Q8IVM0 306 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 ZNF513Q8N8E2 541 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 APPL2Q8NEU8 664 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 CD101Q93033 1021 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
GGPS1-201ENST00000282841 SELENOOQ9BVL4 669 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 PCSK1NQ9UHG2 260 aa11.61□□□□□ -0.55
GGPS1-201ENST00000282841 KBTBD13C9JR72 458 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 GABBR2O75899 941 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 B3GAT3O94766 335 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 TKTP29401 623 aaKnown RBP11.6□□□□□ -0.55
GGPS1-201ENST00000282841 PBX3P40426 434 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 YWHAEP62258 255 aaKnown RBP11.6□□□□□ -0.55
GGPS1-201ENST00000282841 NKX3-2P78367 333 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 INCA1Q0VD86 236 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 KAZNQ674X7 775 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 PLEKHA7Q6IQ23 1121 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 C11orf63Q6NUN7 778 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 CC2D1AQ6P1N0 951 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-201ENST00000282841 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 ADGRF2Q8IZF7 708 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 FEZF2Q8TBJ5 459 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
GGPS1-201ENST00000282841 LINC01599Q8WXQ3 324 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 ATG4AQ8WYN0 398 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 C18orf8Q96DM3 657 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
GGPS1-201ENST00000282841 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 VRTNQ9H8Y1 702 aa11.6□□□□□ -0.55
GGPS1-201ENST00000282841 CYP3A43Q9HB55 503 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms