RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 WDR49Q8IV35 697 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 P3H4Q92791 437 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 ACAP3Q96P50 834 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 ACO2Q99798 780 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 DHX35Q9H5Z1 703 aaKnown RBP12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 CD248Q9HCU0 757 aa12.48□□□□□ -0.41
SLC13A3-201ENST00000279027 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 ZBED1O96006 694 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 INHBAP08476 426 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CENPCQ03188 943 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 ART4Q93070 314 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 WHRNQ9P202 907 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 MAFBQ9Y5Q3 323 aaPredicted RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 NFASCO94856 1347 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 A8MXQ7 604 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 PSTPIP1O43586 416 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 HBP1O60381 514 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CDH16O75309 829 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 ARL2P36404 184 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 TAF5Q15542 800 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CCNG2Q16589 344 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 MON1BQ7L1V2 547 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 ERO1BQ86YB8 467 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 TEX2Q8IWB9 1127 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 EXD1Q8NHP7 514 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 AVENQ9NQS1 362 aaPredicted RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 PHBP35232 272 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 PIGHQ14442 188 aaPredicted RBP12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 RIOX2Q8IUF8 465 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CDCA5Q96FF9 252 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 FBXL18Q96ME1 805 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 CDT1Q9H211 546 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 RAB6BQ9NRW1 208 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
SLC13A3-201ENST00000279027 TULP2O00295 520 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 KCNN4O15554 427 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 ASS1P00966 412 aaKnown RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 KRT7P08729 469 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 CD48P09326 243 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 ARL4CP56559 192 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 CCNA1P78396 465 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 TFDP3Q5H9I0 405 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 KIAA0319LQ8IZA0 1049 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 PCYT2Q99447 389 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 KAT6AQ92794 2004 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 A0A0G2JND7 137 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 A6NJR5 290 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 NEBLO76041 1014 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 MT-ND3P03897 115 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 APRTP07741 180 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 BCAR1P56945 870 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 OVGP1Q12889 678 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 PTPN20Q4JDL3 420 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 TTC16Q8NEE8 873 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 RNF34Q969K3 372 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 SLC13A1Q9BZW2 595 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 C12orf65Q9H3J6 166 aaKnown RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 XPO7Q9UIA9 1087 aaKnown RBP12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.41
SLC13A3-201ENST00000279027 AKAP5P24588 427 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 ALDH3A1P30838 453 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 NDST1P52848 882 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 PKN2Q16513 984 aaKnown RBP12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 PRAMEF19Q5SWL8 479 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 ARMCX2Q7L311 632 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 CCDC91Q7Z6B0 441 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 GPC2Q8N158 579 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 KLC4Q9NSK0 619 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 ASNSD1Q9NWL6 643 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 HMGXB4Q9UGU5 601 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 NENFQ9UMX5 172 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 LY75O60449 1722 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 CCDC195A0A1B0GUA6 201 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 GPR25O00155 361 aa12.46□□□□□ -0.42
SLC13A3-201ENST00000279027 SAT1P21673 171 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms