RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PSMD6Q15008 389 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 CCDC6Q16204 474 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 SYCP2LQ5T4T6 812 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 OR5B17Q8NGF7 314 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 PDCD2LQ9BRP1 358 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 POLR3FQ9H1D9 316 aaPredicted RBP28.9■■■□□ 2.22
CBX4-201ENST00000269397 NMRK1Q9NWW6 199 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 AGO2Q9UKV8 859 aaKnown RBP28.9■■■□□ 2.22
CBX4-201ENST00000269397 PCDHA10Q9Y5I2 948 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 TCRBV7S3A2A0A539 114 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 HARSP12081 509 aaKnown RBP28.9■■■□□ 2.22
CBX4-201ENST00000269397 CHRNA5P30532 468 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 SFNP31947 248 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 NRLP54845 237 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 TFDP3Q5H9I0 405 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 DRICH1Q6PGQ1 229 aaPredicted RBP28.9■■■□□ 2.22
CBX4-201ENST00000269397 SPDYE1Q8NFV5 336 aaPredicted RBP28.9■■■□□ 2.22
CBX4-201ENST00000269397 DCLRE1BQ9H816 532 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 MANSC1Q9H8J5 431 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 CNTNAP1P78357 1384 aa28.9■■■□□ 2.22
CBX4-201ENST00000269397 KRT36O76013 467 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 MMP8P22894 467 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 RCN1Q15293 331 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 KCNT1Q5JUK3 1230 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 CYP4A22Q5TCH4 519 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 ARHGEF16Q5VV41 709 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 FBXO36Q8NEA4 188 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 ZBED4O75132 1171 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 SERPINB3P29508 390 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 CDKN2BP42772 138 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 KPNB1Q14974 876 aaKnown RBP28.89■■■□□ 2.22
CBX4-201ENST00000269397 BBS9Q3SYG4 887 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 DTX3LQ8TDB6 740 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 UCMAQ8WVF2 138 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 ZBTB10Q96DT7 871 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 PCDH9Q9HC56 1237 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 RBAKQ9NYW8 714 aaPredicted RBP28.89■■■□□ 2.22
CBX4-201ENST00000269397 LNPEPQ9UIQ6 1025 aa28.89■■■□□ 2.22
CBX4-201ENST00000269397 DRG1Q9Y295 367 aaKnown RBP28.89■■■□□ 2.22
CBX4-201ENST00000269397 NFASCO94856 1347 aa28.89■■■□□ 2.21
CBX4-201ENST00000269397 HAUS5O94927 633 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 TSNAXIP1Q2TAA8 658 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 DNAJC24Q6P3W2 148 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 FBXO41Q8TF61 875 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 CPT1BQ92523 772 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 TLE6Q9H808 572 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 ZWILCHQ9H900 591 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 BRD2P25440 801 aaKnown RBP28.88■■■□□ 2.21
CBX4-201ENST00000269397 TMEM154Q6P9G4 183 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 RFX8Q6ZV50 586 aa28.88■■■□□ 2.21
CBX4-201ENST00000269397 ZBTB12Q9Y330 459 aaPredicted RBP28.88■■■□□ 2.21
CBX4-201ENST00000269397 RAD17O75943 681 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 CLDN10P78369 228 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ZBTB16Q05516 673 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 GNPTABQ3T906 1256 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 TTC7BQ86TV6 843 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ACTL9Q8TC94 416 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 SAR1AQ9NR31 198 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 PXMP2Q9NR77 195 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 GINM1Q9NU53 330 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 FARP1Q9Y4F1 1045 aaPredicted RBP28.87■■■□□ 2.21
CBX4-201ENST00000269397 NVLO15381 856 aaKnown RBP28.87■■■□□ 2.21
CBX4-201ENST00000269397 ITGAVP06756 1048 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 NEFHP12036 1026 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ERFP50548 548 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 MXRA7P84157 204 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 OTUD4Q01804 1114 aaKnown RBP28.87■■■□□ 2.21
CBX4-201ENST00000269397 DLGAP5Q15398 846 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 MTERF2Q49AM1 385 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ACSBG2Q5FVE4 666 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 NRG4Q8WWG1 115 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 TMEM143Q96AN5 459 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 SPATS2LQ9NUQ6 558 aaKnown RBP28.87■■■□□ 2.21
CBX4-201ENST00000269397 ARHGAP28Q9P2N2 729 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 AGTPBP1Q9UPW5 1226 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 GYG2O15488 501 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ADGRD1Q6QNK2 874 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 PALM2Q8IXS6 379 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 SCYL3Q8IZE3 742 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 BANPQ8N9N5 519 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 ATP11CQ8NB49 1132 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 NKD2Q969F2 451 aaPredicted RBP28.87■■■□□ 2.21
CBX4-201ENST00000269397 BTBD10Q9BSF8 475 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 TSSK1BQ9BXA7 367 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 TRIM55Q9BYV6 548 aa28.87■■■□□ 2.21
CBX4-201ENST00000269397 GSC2O15499 205 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 CCDC22O60826 627 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 STBD1O95210 358 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 RINLQ6ZS11 566 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 MZB1Q8WU39 189 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 TTC17Q96AE7 1141 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 ZNF646O15015 1829 aaPredicted RBP28.86■■■□□ 2.21
CBX4-201ENST00000269397 ARFIP2P53365 341 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 ARL4CP56559 192 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 MCL1Q07820 350 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 SNX30Q5VWJ9 437 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 DCAKDQ8WVC6 231 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 PTCD3Q96EY7 689 aaKnown RBP28.86■■■□□ 2.21
CBX4-201ENST00000269397 TMEM120AQ9BXJ8 343 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 C17orf75Q9HAS0 396 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms