RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 A0A1W2PPM1 405 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 NQO1P15559 274 aaKnown RBP20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PECAM1P16284 738 aaPredicted RBP20.1■□□□□ 0.81
CPNE7-201ENST00000268720 GDF10P55107 478 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 TFAMQ00059 246 aaKnown RBP20.1■□□□□ 0.81
CPNE7-201ENST00000268720 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 ZBED8Q8IZ13 594 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 FEZF2Q8TBJ5 459 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 GPR20Q99678 358 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 CISHQ9NSE2 258 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PCSK1NQ9UHG2 260 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PRKCBP05771 671 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 CD48P09326 243 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 TGFB3P10600 412 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 CDH8P55286 799 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
CPNE7-201ENST00000268720 SPATA21Q7Z572 469 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 ATL2Q8NHH9 583 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 AGAP11Q8TF27 550 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PPP1R13LQ8WUF5 828 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 TFAP2BQ92481 460 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 VCPIP1Q96JH7 1222 aa20.1■□□□□ 0.81
CPNE7-201ENST00000268720 PSTPIP1O43586 416 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 SUN1O94901 812 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 KRT16P08779 473 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 C1QBPQ07021 282 aaKnown RBP20.09■□□□□ 0.81
CPNE7-201ENST00000268720 PTK6Q13882 451 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 FBXO16Q8IX29 292 aaPredicted RBP20.09■□□□□ 0.81
CPNE7-201ENST00000268720 TMEM192Q8IY95 271 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 WDTC1Q8N5D0 677 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 CKAP2Q8WWK9 683 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 PARVAQ9NVD7 372 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 NEU2Q9Y3R4 380 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 LAMA3Q16787 3333 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 EXOC1LA0A1B0GW35 172 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 SLC8A1P32418 973 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 NFX1Q12986 1120 aaKnown RBP20.09■□□□□ 0.81
CPNE7-201ENST00000268720 DCUN1D2Q6PH85 259 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 KATNAL2Q8IYT4 538 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 KLHL29Q96CT2 875 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 NLRP4Q96MN2 994 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 MAF1Q9H063 256 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 CPSF3Q9UKF6 684 aaKnown RBP20.09■□□□□ 0.81
CPNE7-201ENST00000268720 POLIQ9UNA4 740 aa20.09■□□□□ 0.81
CPNE7-201ENST00000268720 NOP56O00567 594 aaKnown RBP20.08■□□□□ 0.81
CPNE7-201ENST00000268720 OGTO15294 1046 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 MAGEA4P43358 317 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 EFNA5P52803 228 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 WDR4P57081 412 aaKnown RBP20.08■□□□□ 0.81
CPNE7-201ENST00000268720 MAPK6Q16659 721 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 IER5Q5VY09 327 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 EEF1DP3Q658K8 133 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 ANKLE1Q8NAG6 615 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 KCNV2Q8TDN2 545 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.81
CPNE7-201ENST00000268720 TMEM191CA6NGB0 347 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 SGK1O00141 431 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 KRT19P08727 400 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 HOXC6P09630 235 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 TMEM191BP0C7N4 346 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 KRT15P19012 456 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 ANKRD22Q5VYY1 191 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 CDCA2Q69YH5 1023 aaPredicted RBP20.08■□□□□ 0.8
CPNE7-201ENST00000268720 GPAT2Q6NUI2 795 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 SCINQ9Y6U3 715 aa20.08■□□□□ 0.8
CPNE7-201ENST00000268720 PAPPA2Q9BXP8 1791 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 IQCF3P0C7M6 154 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 FGFR1P11362 822 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 CD19P15391 556 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 ERFP50548 548 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 GALNTL6Q49A17 601 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 MAGEC3Q8TD91 643 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 PDGFCQ9NRA1 345 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 MCM3APO60318 1980 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 INO80B-WBP1J3KQ70 363 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 UPP2O95045 317 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 GCAP28676 217 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 SSTR1P30872 391 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 GBP2P32456 591 aaPredicted RBP20.07■□□□□ 0.8
CPNE7-201ENST00000268720 GCLCP48506 637 aaPredicted RBP20.07■□□□□ 0.8
CPNE7-201ENST00000268720 CLCN3P51790 818 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 COPS2P61201 443 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 MCL1Q07820 350 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 CCNG2Q16589 344 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 DUOXA2Q1HG44 320 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 INO80BQ9C086 356 aaPredicted RBP20.07■□□□□ 0.8
CPNE7-201ENST00000268720 NIF3L1Q9GZT8 377 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
CPNE7-201ENST00000268720 A0A0G2JLL6 359 aaPredicted RBP20.06■□□□□ 0.8
CPNE7-201ENST00000268720 TCRBV7S3A2A0A539 114 aa20.06■□□□□ 0.8
CPNE7-201ENST00000268720 TCRBV5S1A1TA0A578 114 aa20.06■□□□□ 0.8
CPNE7-201ENST00000268720 OVGP1Q12889 678 aa20.06■□□□□ 0.8
CPNE7-201ENST00000268720 CELF3Q5SZQ8 465 aaKnown RBP20.06■□□□□ 0.8
CPNE7-201ENST00000268720 ZNF449Q6P9G9 518 aa20.06■□□□□ 0.8
CPNE7-201ENST00000268720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■□□ 19.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms