RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ANKZF1Q9H8Y5 726 aa16.29■□□□□ 0.2
COPS3-201ENST00000268717 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
COPS3-201ENST00000268717 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
COPS3-201ENST00000268717 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
COPS3-201ENST00000268717 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 PGRMC1O00264 195 aaKnown RBP16.28■□□□□ 0.2
COPS3-201ENST00000268717 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
COPS3-201ENST00000268717 SKIP12755 728 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 MCM3P25205 808 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 CDH8P55286 799 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 TAP1Q03518 808 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 DSC3Q14574 896 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 GPNMBQ14956 572 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 SV2CQ496J9 727 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
COPS3-201ENST00000268717 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 TRAF7Q6Q0C0 670 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 PASD1Q8IV76 773 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 C11orf70Q9BRQ4 267 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 MTIF3Q9H2K0 278 aaKnown RBP16.28■□□□□ 0.2
COPS3-201ENST00000268717 TMEM59LQ9UK28 342 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 PADI3Q9ULW8 664 aa16.28■□□□□ 0.2
COPS3-201ENST00000268717 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 FAM170AA1A519 330 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 ITGA4P13612 1032 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 CD19P15391 556 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 MAN1A1P33908 653 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 CTNNA1P35221 906 aaKnown RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 TAF6P49848 677 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 NDST1P52848 882 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 PDCD11Q14690 1871 aaKnown RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 LPIN1Q14693 890 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 BRD3Q15059 726 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 GLRA4Q5JXX5 417 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 WDR93Q6P2C0 686 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 FBXO38Q6PIJ6 1188 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 DPH6Q7L8W6 267 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 C1orf131Q8NDD1 294 aaKnown RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 TWNKQ96RR1 684 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 NAP1L3Q99457 506 aaPredicted RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 AGO3Q9H9G7 860 aaKnown RBP16.27■□□□□ 0.2
COPS3-201ENST00000268717 ANAPC7Q9UJX3 599 aa16.27■□□□□ 0.2
COPS3-201ENST00000268717 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
COPS3-201ENST00000268717 MYO9BQ13459 2157 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 CCDC151A5D8V7 595 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 MYO1FO00160 1098 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 O00370 1275 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 PTGESO14684 152 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 CXCL10P02778 98 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 COMTP21964 271 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 MAMLD1Q13495 774 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 MESDQ14696 234 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 MMS22LQ6ZRQ5 1243 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 PARD6BQ9BYG5 372 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 UBN1Q9NPG3 1134 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.19
COPS3-201ENST00000268717 A0A0U1RQF3 1178 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 TCRBV5S1A1TA0A578 114 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 PPEF2O14830 753 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 CEP104O60308 925 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 NBNO60934 754 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 PROSCO94903 275 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 CD52P31358 61 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 MBTPS1Q14703 1052 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 LCLAT1Q6UWP7 414 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 Q7L0L9 218 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 WDTC1Q8N5D0 677 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 HNRNPLLQ8WVV9 542 aaKnown RBP16.26■□□□□ 0.19
COPS3-201ENST00000268717 MS4A14Q96JA4 679 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 MIS12Q9H081 205 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 KLK14Q9P0G3 267 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 PCDHA3Q9Y5H8 950 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 PTPRSQ13332 1948 aa16.26■□□□□ 0.19
COPS3-201ENST00000268717 CCDC188H7C350 402 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 SPOPO43791 374 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 GHRP10912 638 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 PAX3P23760 479 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 GABRB2P47870 512 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 PEX5P50542 639 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 DNA2P51530 1060 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 DENND1BQ6P3S1 775 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 FEZF2Q8TBJ5 459 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 HEXIM2Q96MH2 286 aaKnown RBP16.25■□□□□ 0.19
COPS3-201ENST00000268717 MICAL3Q7RTP6 2002 aa16.25■□□□□ 0.19
COPS3-201ENST00000268717 ZBBXA8MT70 800 aa16.24■□□□□ 0.19
COPS3-201ENST00000268717 GRXCR1A8MXD5 290 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms