RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ARHGAP26Q9UNA1 814 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC27A1Q6PCB7 646 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 CGRRF1Q99675 332 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 FBXO2Q9UK22 296 aaPredicted RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SUFUQ9UMX1 484 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 ZMYM2Q9UBW7 1377 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 CA12O43570 354 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 GRK3P35626 688 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 DDR1Q08345 913 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 MKNK1Q9BUB5 465 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SNTG2Q9NY99 539 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 SNX24Q9Y343 169 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 PCDHB2Q9Y5E7 798 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 CEMIPQ8WUJ3 1361 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 NFIBO00712 420 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.149e-6■■■■□ 22.2
PDGFRB-201ENST00000261799 C11orf96Q7Z7L8 435 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 DCLK3Q9C098 648 aa14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.18□□□□□ -0.14
PDGFRB-201ENST00000261799 EIF4E1BA6NMX2 242 aaKnown RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 CAMK2GQ13555 558 aaPredicted RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 CUL2Q13617 745 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 EDRF1Q3B7T1 1238 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 KCTD16Q68DU8 428 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 NAPEPLDQ6IQ20 393 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 KIRREL3Q8IZU9 778 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC195A0A1B0GUA6 201 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 PBLDP30039 288 aaPredicted RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 SESN3P58005 492 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 MRPL46Q9H2W6 279 aaKnown RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 DDX43Q9NXZ2 648 aaKnown RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 EPB42P16452 691 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 PPM1AP35813 382 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 TGM3Q08188 693 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 ANKRD23Q86SG2 305 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 SLC20A1Q8WUM9 679 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 GOLPH3LQ9H4A5 285 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 RWDD3Q9Y3V2 267 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 ARP10275 920 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 CHRM3P20309 590 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 NCALDP61601 193 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 PRKAA1Q13131 559 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 IZUMO3Q5VZ72 239 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 WDR49Q8IV35 697 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 PPP1R16AQ96I34 528 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 MAGEB10Q96LZ2 347 aaPredicted RBP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 ZFP42Q96MM3 310 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 SYT17Q9BSW7 474 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 TXLNGQ9NUQ3 528 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
PDGFRB-201ENST00000261799 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 EPHB2P29323 1055 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 MAPRE2Q15555 327 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 CATSPERGQ6ZRH7 1159 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 CDV3Q9UKY7 258 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 TRAV19A0A0A6YYK7 116 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 FAM187AA6NFU0 413 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 PRMT2P55345 433 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 CCL23P55773 120 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 PABPC1LQ4VXU2 614 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 ACOT1Q86TX2 421 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 NMRK1Q9NWW6 199 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 IFRD1O00458 451 aaPredicted RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 RFC1P35251 1148 aaPredicted RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 C21orf59P57076 290 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 TRMT10CQ7L0Y3 403 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 UMODL1Q5DID0 1318 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 GRK4P32298 578 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 GCKP35557 465 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 SMAD1Q15797 465 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 ALS2CLQ60I27 953 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 MYRIPQ8NFW9 859 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 A0A1W2PQC6 194 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 RASA4BC9J798 803 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 RASA4O43374 803 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 ADH1AP07327 375 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 CYP2A6P11509 494 aaPredicted RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 POLR2EP19388 210 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 FBXO47Q5MNV8 452 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 C4orf19Q8IY42 314 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 TFB1MQ8WVM0 346 aaKnown RBP14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 ADAM2Q99965 735 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 MTMR12Q9C0I1 747 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 LNPEPQ9UIQ6 1025 aa14.16□□□□□ -0.14
PDGFRB-201ENST00000261799 PCDHB9Q9Y5E1 797 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms