RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 DENND1BQ6P3S1 775 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 CEP120Q8N960 986 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 ZBTB10Q96DT7 871 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 SMC6Q96SB8 1091 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 CYTH4Q9UIA0 394 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 POLIQ9UNA4 740 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 LCTP09848 1927 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 TCRBV7S3A2A0A539 114 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ALOX15BO15296 676 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 MSCO60682 206 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ABCD1P33897 745 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 OTUD4Q01804 1114 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 RIPK1Q13546 671 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 MORF4L2Q15014 288 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 RNF43Q68DV7 783 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 DRICH1Q6PGQ1 229 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 THNSL1Q8IYQ7 743 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ACTL9Q8TC94 416 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ERP27Q96DN0 273 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ETNK1Q9HBU6 452 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 WDR91A4D1P6 747 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 C3orf70A6NLC5 250 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 ANP32DO95626 131 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 KRT4P19013 534 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 PSMA2P25787 234 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 MSH2P43246 934 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CDH8P55286 799 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 TAF5Q15542 800 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CCDC142Q17RM4 750 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 PTPN20Q4JDL3 420 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CENPUQ71F23 418 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 RIBC1Q8N443 379 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CCHCR1Q8TD31 782 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 NIF3L1Q9GZT8 377 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 GINM1Q9NU53 330 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 PCSK1NQ9UHG2 260 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CHKBQ9Y259 395 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 DRG1Q9Y295 367 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CLUHO75153 1309 aa17.22■□□□□ 0.35
TM9SF1-201ENST00000261789 CST8O60676 142 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 ITGAVP06756 1048 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 CD19P15391 556 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 ELF1P32519 619 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 STAT5BP51692 787 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 MCL1Q07820 350 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 TRPC3Q13507 836 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 SPARCL1Q14515 664 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 TARBP2Q15633 366 aaKnown RBP17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 HIF1AQ16665 826 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 WDR49Q8IV35 697 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 TTC25Q96NG3 672 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 KCNG1Q9UIX4 513 aa17.21■□□□□ 0.35
TM9SF1-201ENST00000261789 PIGHQ14442 188 aaPredicted RBP17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 LY6KQ17RY6 165 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 LRRC38Q5VT99 294 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 RNF149Q8NC42 400 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 SLC35B2Q8TB61 432 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 NKD2Q969F2 451 aaPredicted RBP17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 UTP4Q969X6 686 aaKnown RBP17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 FOXP3Q9BZS1 431 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 R3HDMLQ9H3Y0 253 aa17.21■□□□□ 0.34
TM9SF1-201ENST00000261789 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 NFKBIEO00221 500 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PRPF4O43172 522 aaKnown RBP eCLIP17.2■□□□□ 0.342e-9■■■■■ 33.1
TM9SF1-201ENST00000261789 LRCH4O75427 683 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 TOM1L1O75674 476 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 STAM2O75886 525 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 UNC5CO95185 931 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 TCF7P36402 384 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ASPAP45381 313 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 DCAF15Q66K64 600 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 TDRPQ86YL5 185 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 NSMCE1Q8WV22 266 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 CPT1BQ92523 772 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 PCDH9Q9HC56 1237 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 RABGEF1Q9UJ41 708 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 HAO1Q9UJM8 370 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 LSM8O95777 96 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-201ENST00000261789 KRT19P08727 400 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms